RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TRAIPQ9BWF2 469 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 NFKBIZQ9BYH8 718 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 NT5C3AQ9H0P0 336 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 FBXO2Q9UK22 296 aaPredicted RBP19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 CDH23Q9H251 3354 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 GBF1Q92538 1859 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 ZSCAN22P10073 491 aaPredicted RBP19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 POU3F3P20264 500 aaPredicted RBP19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 TTC3P53804 2025 aa19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 RINT1Q6NUQ1 792 aa19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 CLIC6Q96NY7 704 aa19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 CSRNP2Q9H175 543 aa19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 FAM105AQ9NUU6 356 aa19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 TFIP11Q9UBB9 837 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 HCSTQ9UBK5 93 aa19.89■□□□□ 0.77
SNRPA1-201ENST00000254193 H3BNC9 293 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 B4GALT5O43286 388 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 EOMESO95936 686 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 PLA2G4BP0C869 781 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 GPM6BQ13491 265 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 SLC39A14Q15043 492 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 KARSQ15046 597 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 AMHR2Q16671 573 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 FOXD4L6Q3SYB3 417 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 CLLU1OSQ5K130 101 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 UBXN11Q5T124 520 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 FOXD4L3Q6VB84 417 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 C1orf186Q6ZWK4 172 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 USP49Q70CQ1 688 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 LRRC15Q8TF66 581 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 KIFAP3Q92845 792 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 LPPQ93052 612 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 CALML4Q96GE6 196 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 CPB2Q96IY4 423 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 EPSTI1Q96J88 318 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 CASD1Q96PB1 797 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 TMEM117Q9H0C3 514 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 PCDHB2Q9Y5E7 798 aa19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 SRPRBQ9Y5M8 271 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-201ENST00000254193 COL4A6Q14031 1691 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 MEIS3P2A8K0S8 358 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 HOXA2O43364 376 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 SLC26A4O43511 780 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 HIP1RO75146 1068 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 PDIA4P13667 645 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 NCBP1Q09161 790 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 RAD51AP2Q09MP3 1159 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 PCBP1Q15365 356 aaKnown RBP eCLIP19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 CDCA2Q69YH5 1023 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 ABI1Q8IZP0 508 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 DAW1Q8N136 415 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 KCTD17Q8N5Z5 321 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 SYT2Q8N9I0 419 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 RASSF8Q8NHQ8 419 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 HELQQ8TDG4 1101 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 IFT74Q96LB3 600 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 ZNF396Q96N95 335 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 KIFC3Q9BVG8 833 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 TYW1Q9NV66 732 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 RWDD3Q9Y3V2 267 aa19.87■□□□□ 0.77
SNRPA1-201ENST00000254193 CHD7Q9P2D1 2997 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 C5orf67F2Z3F1 127 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 ZNF623O75123 536 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 F13A1P00488 732 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 RB1P06400 928 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 SKIP12755 728 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 ARF4P18085 180 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 PLCG1P19174 1290 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 NAMPTP43490 491 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 NASPP49321 788 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 RAB27AP51159 221 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 SLC12A3P55017 1021 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 MAPK7Q13164 816 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 PPP2R5AQ15172 486 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 SPOUT1Q5T280 376 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 ZBTB8OSQ8IWT0 167 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 DEPTORQ8TB45 409 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 C11orf84Q9BUA3 381 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 EIF2AQ9BY44 585 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 C2orf40Q9H1Z8 148 aa19.86■□□□□ 0.77
SNRPA1-201ENST00000254193 SFI1A8K8P3 1242 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 LIG1P18858 919 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 AXLP30530 894 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 DHX8Q14562 1220 aaKnown RBP19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 STK38Q15208 465 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 NOTUMQ6P988 496 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 LRRC55Q6ZSA7 311 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 CDR2LQ86X02 465 aaPredicted RBP19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 LINC00301Q8NCQ3 95 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 SYMPKQ92797 1274 aaKnown RBP19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 PLVAPQ9BX97 442 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 CCSER1Q9C0I3 900 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 FZD8Q9H461 694 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 BLOC1S4Q9NUP1 217 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 USP20Q9Y2K6 914 aa19.85■□□□□ 0.77
SNRPA1-201ENST00000254193 NPHP3-ACAD11A0A0J9YXS1 232 aa19.84■□□□□ 0.77
SNRPA1-201ENST00000254193 TTLL13PA6NNM8 815 aa19.84■□□□□ 0.77
SNRPA1-201ENST00000254193 CCDC169A6NNP5 214 aa19.84■□□□□ 0.77
SNRPA1-201ENST00000254193 GRM6O15303 877 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms