RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 GMCL1Q96IK5 515 aa19.92■□□□□ 0.78
LRP3-201ENST00000253193 DNAJC17Q9NVM6 304 aaKnown RBP19.92■□□□□ 0.78
LRP3-201ENST00000253193 KIAA1551Q9HCM1 1747 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 PRKCIP41743 596 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 VAMP7P51809 220 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 ZNF844Q08AG5 666 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 KRT27Q7Z3Y8 459 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 ASIC3Q9UHC3 531 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 TESPA1A2RU30 521 aaPredicted RBP19.91■□□□□ 0.78
LRP3-201ENST00000253193 TMEM253P0C7T8 217 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 EIF2AK2P19525 551 aaKnown RBP19.91■□□□□ 0.78
LRP3-201ENST00000253193 C1orf186Q6ZWK4 172 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 CCDC50Q8IVM0 306 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 ACP6Q9NPH0 428 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 PHF20L1A8MW92 1017 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 LDHDQ86WU2 507 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 PALB2Q86YC2 1186 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 SAAL1Q96ER3 474 aa19.91■□□□□ 0.78
LRP3-201ENST00000253193 ANKRD62A6NC57 917 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 JAG1P78504 1218 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 COL23A1Q86Y22 540 aaPredicted RBP19.9■□□□□ 0.78
LRP3-201ENST00000253193 ZNF653Q96CK0 615 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 BTBD6Q96KE9 485 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 HSD17B14Q9BPX1 270 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 CBWD1Q9BRT8 395 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 COL22A1Q8NFW1 1626 aaPredicted RBP19.9■□□□□ 0.78
LRP3-201ENST00000253193 EIF3DO15371 548 aaKnown RBP eCLIP19.9■□□□□ 0.78
LRP3-201ENST00000253193 DLG4P78352 724 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 BIRC3Q13489 604 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 GKAP1Q5VSY0 366 aaPredicted RBP19.9■□□□□ 0.78
LRP3-201ENST00000253193 EPM2AIP1Q7L775 607 aaPredicted RBP19.9■□□□□ 0.78
LRP3-201ENST00000253193 CEP57Q86XR8 500 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 NEK9Q8TD19 979 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 KCNK9Q9NPC2 374 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 SIX2Q9NPC8 291 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 TMEM150BA6NC51 233 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 CYP26A1O43174 497 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 TRIP13Q15645 432 aaPredicted RBP19.9■□□□□ 0.78
LRP3-201ENST00000253193 C18orf8Q96DM3 657 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 ACCSQ96QU6 501 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 PSMD1Q99460 953 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 PNMA2Q9UL42 364 aa19.9■□□□□ 0.78
LRP3-201ENST00000253193 KCNJ1P48048 391 aa19.89■□□□□ 0.78
LRP3-201ENST00000253193 GMCL1P1Q8NEA9 526 aa19.89■□□□□ 0.78
LRP3-201ENST00000253193 AGBL1Q96MI9 1066 aa19.89■□□□□ 0.78
LRP3-201ENST00000253193 CD248Q9HCU0 757 aa19.89■□□□□ 0.78
LRP3-201ENST00000253193 SEL1LQ9UBV2 794 aa19.89■□□□□ 0.78
LRP3-201ENST00000253193 SLC26A4O43511 780 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 C21orf2O43822 256 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 GPC5P78333 572 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 DACT2Q5SW24 774 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 INTS8Q75QN2 995 aaKnown RBP19.89■□□□□ 0.77
LRP3-201ENST00000253193 RHOT2Q8IXI1 618 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 LARGE2Q8N3Y3 721 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 SCLT1Q96NL6 688 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 ZBTB12Q9Y330 459 aaPredicted RBP19.89■□□□□ 0.77
LRP3-201ENST00000253193 IGSF9BQ9UPX0 1349 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 SUGP1Q8IWZ8 645 aaKnown RBP19.89■□□□□ 0.77
LRP3-201ENST00000253193 JPH2Q9BR39 696 aaPredicted RBP19.89■□□□□ 0.77
LRP3-201ENST00000253193 GPRC5CQ9NQ84 441 aa19.89■□□□□ 0.77
LRP3-201ENST00000253193 PMS2P54278 862 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 ITGB3BPQ13352 177 aaPredicted RBP19.88■□□□□ 0.77
LRP3-201ENST00000253193 PHLDB3Q6NSJ2 640 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 LRIG3Q6UXM1 1119 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 XXYLT1Q8NBI6 393 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 SLC30A5Q8TAD4 765 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 CYFIP2Q96F07 1278 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 FGFR4P22455 802 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 CIITAP33076 1130 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 SPATS2Q86XZ4 545 aaKnown RBP19.88■□□□□ 0.77
LRP3-201ENST00000253193 MREGQ8N565 214 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 KAT5Q92993 513 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 FAM107AO95990 144 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 SMTNP53814 917 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 ADCY1Q08828 1119 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 GRIPAP1Q4V328 841 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 CCDC38Q502W7 563 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 KIAA1755Q5JYT7 1200 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 OTUD6AQ7L8S5 288 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 JAMLQ86YT9 394 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 FBXO25Q8TCJ0 367 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 ERP44Q9BS26 406 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 IDI2Q9BXS1 227 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 TMEM206Q9H813 350 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 NAV1Q8NEY1 1877 aa19.88■□□□□ 0.77
LRP3-201ENST00000253193 COMTP21964 271 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 PPP2R5EQ16537 467 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.87■□□□□ 0.77
LRP3-201ENST00000253193 MKNK1Q9BUB5 465 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 INTUQ9ULD6 942 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 LAMB1P07942 1786 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 GTPBP10A4D1E9 387 aaKnown RBP19.87■□□□□ 0.77
LRP3-201ENST00000253193 DCDC2CA8MYV0 355 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 CHADLQ6NUI6 762 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 CCDC137Q6PK04 289 aaKnown RBP19.87■□□□□ 0.77
LRP3-201ENST00000253193 HAUS6Q7Z4H7 955 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 TMC3Q7Z5M5 1100 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 AZI2Q9H6S1 392 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 LRRC4CQ9HCJ2 640 aa19.87■□□□□ 0.77
LRP3-201ENST00000253193 ANXA13P27216 316 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms