RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 NRDE2Q9H7Z3 1164 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 TBC1D13Q9NVG8 400 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 SEC63Q9UGP8 760 aaKnown RBP13.6□□□□□ -0.23
RFPL3-201ENST00000249007 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
RFPL3-201ENST00000249007 MYBP10242 640 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 PMLP29590 882 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 CLCN3P51790 818 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 SHC2P98077 582 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 PRKCQQ04759 706 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
RFPL3-201ENST00000249007 MLF2Q15773 248 aaPredicted RBP13.59□□□□□ -0.23
RFPL3-201ENST00000249007 LPAL2Q16609 132 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 UBE2SQ16763 222 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 GLB1LQ6UWU2 654 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 CCDC60Q8IWA6 550 aaPredicted RBP13.59□□□□□ -0.23
RFPL3-201ENST00000249007 CKAP2LQ8IYA6 745 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 FAM126AQ9BYI3 521 aaPredicted RBP13.59□□□□□ -0.23
RFPL3-201ENST00000249007 ADAMTS10Q9H324 1103 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 PIDD1Q9HB75 910 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 DNAJB4Q9UDY4 337 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 INPP5FQ9Y2H2 1132 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 COL4A3Q01955 1670 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 MYH15Q9Y2K3 1946 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 WDFY3Q8IZQ1 3526 aa13.59□□□□□ -0.23
RFPL3-201ENST00000249007 C2CD2LO14523 706 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 LILRB3O75022 631 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 LRP3O75074 770 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 CCNE2O96020 404 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 GLUD1P00367 558 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 ADH1AP07327 375 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 KIF5BP33176 963 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 SLC11A1P49279 550 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 NOMO2Q5JPE7 1267 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 LAIR1Q6GTX8 287 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 PHKBQ93100 1093 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 ZNF707Q96C28 371 aaPredicted RBP13.58□□□□□ -0.24
RFPL3-201ENST00000249007 SCLT1Q96NL6 688 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 MXRA8Q9BRK3 442 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 RPP25Q9BUL9 199 aaKnown RBP13.58□□□□□ -0.24
RFPL3-201ENST00000249007 SENP2Q9HC62 589 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 PCDHA6Q9UN73 950 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 PCDHA8Q9Y5H6 950 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 SDK1Q7Z5N4 2213 aa13.58□□□□□ -0.24
RFPL3-201ENST00000249007 RALGAPA1Q6GYQ0 2036 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 IFIT3O14879 490 aaKnown RBP13.57□□□□□ -0.24
RFPL3-201ENST00000249007 URODP06132 367 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 PROS1P07225 676 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 CD72P21854 359 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 AK2P54819 239 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 LONRF3Q496Y0 759 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 SLC44A4Q53GD3 710 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 ZBTB41Q5SVQ8 909 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 ABHD15Q6UXT9 468 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 TRMT1LQ7Z2T5 733 aaKnown RBP13.57□□□□□ -0.24
RFPL3-201ENST00000249007 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 FGF14Q92915 247 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 LPPQ93052 612 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 RILPL2Q969X0 211 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 ZNF668Q96K58 619 aaPredicted RBP13.57□□□□□ -0.24
RFPL3-201ENST00000249007 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 SPZ1Q9BXG8 430 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 LTB4R2Q9NPC1 389 aa13.57□□□□□ -0.24
RFPL3-201ENST00000249007 PRMT8Q9NR22 394 aaPredicted RBP13.57□□□□□ -0.24
RFPL3-201ENST00000249007 ERICH2A1L162 156 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 DDX39AO00148 427 aaKnown RBP13.56□□□□□ -0.24
RFPL3-201ENST00000249007 TEX28O15482 410 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 RETP07949 1114 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 DARSP14868 501 aaKnown RBP13.56□□□□□ -0.24
RFPL3-201ENST00000249007 SDSP20132 328 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 ATP4AP20648 1035 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 FGFR4P22455 802 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 TMOD1P28289 359 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 PHKA2P46019 1235 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 N4BP2L1Q5TBK1 243 aaPredicted RBP13.56□□□□□ -0.24
RFPL3-201ENST00000249007 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
RFPL3-201ENST00000249007 RSPO2Q6UXX9 243 aaPredicted RBP13.56□□□□□ -0.24
RFPL3-201ENST00000249007 PRR23CQ6ZRP0 262 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 CATIPQ7Z7H3 387 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 RPS6KC1Q96S38 1066 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 AGO4Q9HCK5 861 aaKnown RBP13.56□□□□□ -0.24
RFPL3-201ENST00000249007 SEMA4GQ9NTN9 838 aa13.56□□□□□ -0.24
RFPL3-201ENST00000249007 ZFP37Q9Y6Q3 630 aaPredicted RBP13.56□□□□□ -0.24
RFPL3-201ENST00000249007 MYH9P35579 1960 aaKnown RBP13.56□□□□□ -0.24
RFPL3-201ENST00000249007 MAGEB2O15479 319 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 GDF9O60383 454 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 B4GALT3O60512 393 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 TRDNQ13061 729 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 CEP55Q53EZ4 464 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 ANKRD45Q5TZF3 282 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 IL31Q6EBC2 164 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 EFCAB12Q6NXP0 572 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 MIS18BP1Q6P0N0 1132 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 PARM1Q6UWI2 310 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 LRRC71Q8N4P6 559 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 CLDN23Q96B33 292 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 MYL10Q9BUA6 226 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms