RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 OATP04181 439 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 NCKAP1LP55160 1127 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 ALCAMQ13740 583 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 ASTE1Q2TB18 679 aaPredicted RBP25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 KCNV1Q6PIU1 500 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 GOLGA5Q8TBA6 731 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 ARHGAP39Q9C0H5 1083 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 VTA1Q9NP79 307 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 PLCB1Q9NQ66 1216 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 CYP26B1Q9NR63 512 aa25.52■■□□□ 1.68
SYNGR3-201ENST00000248121 SLC16A4O15374 487 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 MARK3P27448 753 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 ARHGAP1Q07960 439 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 MAP2K5Q13163 448 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 SYN2Q92777 582 aaPredicted RBP25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 PDLIM7Q9NR12 457 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 GUCA1BQ9UMX6 200 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 MRFAP1Q9Y605 127 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 LCA5LO95447 670 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 KIF11P52732 1056 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 EXOC3L4Q17RC7 722 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 XKR3Q5GH77 459 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 PRAMEF19Q5SWL8 479 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 OTUD6AQ7L8S5 288 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 BSNDQ8WZ55 320 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 ACCSQ96QU6 501 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 TMEM206Q9H813 350 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 SIX2Q9NPC8 291 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 MYO1AQ9UBC5 1043 aa25.51■■□□□ 1.67
SYNGR3-201ENST00000248121 STAT5BP51692 787 aa25.5■■□□□ 1.67
SYNGR3-201ENST00000248121 CAP1Q01518 475 aa25.5■■□□□ 1.67
SYNGR3-201ENST00000248121 ZNF784Q8NCA9 323 aaPredicted RBP25.5■■□□□ 1.67
SYNGR3-201ENST00000248121 NOP56O00567 594 aaKnown RBP25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 CA12O43570 354 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 MAPK8IP2Q13387 824 aaPredicted RBP25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 MYBPC2Q14324 1141 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 KLHDC7AQ5VTJ3 777 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 SFMBT2Q5VUG0 894 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 TMEM174Q8WUU8 243 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 USP6NLQ92738 828 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 CEP89Q96ST8 783 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 KIFC3Q9BVG8 833 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 NUCKS1Q9H1E3 243 aaKnown RBP25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 ZHX1Q9UKY1 873 aaPredicted RBP25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 RBM47A0AV96 593 aaKnown RBP25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 DKC1O60832 514 aaKnown RBP eCLIP25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 UCHL3P15374 230 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 CYP2B6P20813 491 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 CCDC122Q5T0U0 273 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 KIAA1328Q86T90 577 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 TMEM161BQ8NDZ6 487 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 AFAP1L1Q8TED9 768 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 JAKMIP2Q96AA8 810 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 CBWD1Q9BRT8 395 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 FRMD4BQ9Y2L6 1034 aa25.49■■□□□ 1.67
SYNGR3-201ENST00000248121 GTPBP10A4D1E9 387 aaKnown RBP25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 NPTX2P47972 431 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 C12orf56Q8IXR9 622 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 CAPNS2Q96L46 248 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 CARD6Q9BX69 1037 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 GJD2Q9UKL4 321 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 FHOD1Q9Y613 1164 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 DUSP10Q9Y6W6 482 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 SSU72P8A0A1W2PR75 194 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 EXOC3O60645 756 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 SMPD1P17405 629 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 VAV2P52735 878 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 ACVR2BQ13705 512 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 GBP6Q6ZN66 633 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 PCIF1Q9H4Z3 704 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 AIPL1Q9NZN9 384 aa25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 AJAP1Q9UKB5 411 aaPredicted RBP25.48■■□□□ 1.67
SYNGR3-201ENST00000248121 LGR5O75473 907 aa25.47■■□□□ 1.67
SYNGR3-201ENST00000248121 IPO7O95373 1038 aaKnown RBP25.47■■□□□ 1.67
SYNGR3-201ENST00000248121 ZSWIM2Q8NEG5 633 aa25.47■■□□□ 1.67
SYNGR3-201ENST00000248121 LENG1Q96BZ8 264 aaPredicted RBP25.47■■□□□ 1.67
SYNGR3-201ENST00000248121 GCNT4Q9P109 453 aa25.47■■□□□ 1.67
SYNGR3-201ENST00000248121 TRIM49P0CI25 452 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 TRIM49CP0CI26 452 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 CYP2C19P33261 490 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 FMO5P49326 533 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 HTRA3P83110 453 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 RAPGEF1Q13905 1077 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 DEFB115Q30KQ5 88 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 CBWD6Q4V339 395 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 CBWD3Q5JTY5 395 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 CBWD5Q5RIA9 395 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 RDH13Q8NBN7 331 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 GLG1Q92896 1179 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 NTPCRQ9BSD7 190 aaKnown RBP25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 PCDHA13Q9Y5I0 950 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 TNPO2O14787 897 aaKnown RBP25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 AKR1B10O60218 316 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 DGAT1O75907 488 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 SERPING1P05155 500 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 PPP2R5AQ15172 486 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 SPA17Q15506 151 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 FAM160B1Q5W0V3 765 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 KIFAP3Q92845 792 aa25.46■■□□□ 1.67
SYNGR3-201ENST00000248121 DEF6Q9H4E7 631 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms