RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 VSTM4Q8IW00 320 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 SH3TC2Q8TF17 1288 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 CPLX3Q8WVH0 158 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 ANKRD7Q92527 254 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 NLRP4Q96MN2 994 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 HAPLN2Q9GZV7 340 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 AP5M1Q9H0R1 490 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 GBP3Q9H0R5 595 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 ARHGAP28Q9P2N2 729 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 PAXBP1Q9Y5B6 917 aa14.17□□□□□ -0.14
HIF3A-201ENST00000244302 SMIM10L2AP0DMW4 78 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 SMIM10L2BP0DMW5 78 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 RFC5P40937 340 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 PPP1R2P41236 205 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 SMTNP53814 917 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 MTHFD1LQ6UB35 978 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 GPIHBP1Q8IV16 184 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 ZC3H3Q8IXZ2 948 aaKnown RBP14.16□□□□□ -0.14
HIF3A-201ENST00000244302 RNF149Q8NC42 400 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 LMBR1Q8WVP7 490 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 SPIRE2Q8WWL2 714 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 SAAL1Q96ER3 474 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 IFT74Q96LB3 600 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 NOC4LQ9BVI4 516 aaKnown RBP14.16□□□□□ -0.14
HIF3A-201ENST00000244302 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 TRIM17Q9Y577 477 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 PTCH2Q9Y6C5 1203 aa14.16□□□□□ -0.14
HIF3A-201ENST00000244302 SEPT4O43236 478 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 DUSP11O75319 330 aaKnown RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 F2P00734 622 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 PBX1P40424 430 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 SLC26A2P50443 739 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 PURAQ00577 322 aaKnown RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 UBXN1Q04323 297 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 SEZ6Q53EL9 994 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 ARMCX5Q6P1M9 558 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 RUFY4Q6ZNE9 571 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 ACCSQ96QU6 501 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 GTPBP4Q9BZE4 634 aaKnown RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 CDHR5Q9HBB8 845 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 MAGEC2Q9UBF1 373 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 LOXHD1Q8IVV2 1947 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 TREHO43280 583 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 CALUO43852 315 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 HSPA6P17066 643 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 EEF1GP26641 437 aaKnown RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 ADKP55263 362 aaKnown RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 MFSD10Q14728 455 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 EDRF1Q3B7T1 1238 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 CCDC40Q4G0X9 1142 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 PKNOX2Q96KN3 472 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 CRACR2AQ9BSW2 395 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 TARS2Q9BW92 718 aaKnown RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 FAM49AQ9H0Q0 323 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 DMAC2Q9NW81 257 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 HDAC6Q9UBN7 1215 aa14.15□□□□□ -0.14
HIF3A-201ENST00000244302 ZNF215Q9UL58 517 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 TRIP12Q14669 1992 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-201ENST00000244302 CETN3O15182 167 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 B4GALT5O43286 388 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 LRRN2O75325 713 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 FGFR4P22455 802 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 PSEN2P49810 448 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 DLG4P78352 724 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 IRF5Q13568 498 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 ZNF484Q5JVG2 852 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 ZBTB41Q5SVQ8 909 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 IER5Q5VY09 327 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 KIAA0319LQ8IZA0 1049 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 LINC01465Q8N7H1 131 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 DEPTORQ8TB45 409 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 PLEKHO2Q8TD55 490 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 ST6GALNAC4Q9H4F1 302 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 GINS2Q9Y248 185 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 A0A087WZ62 844 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 K7ERI5 159 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 EPHB6O15197 1021 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 ADAMTS4O75173 837 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 KIF20AO95235 890 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 INHAP05111 366 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 NAMPTP43490 491 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 GJA9P57773 515 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 RTP1P59025 263 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 MAP4K3Q8IVH8 894 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 LRRC8AQ8IWT6 810 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 PDCL2Q8N4E4 241 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 PSPC1Q8WXF1 523 aaKnown RBP14.14□□□□□ -0.15
HIF3A-201ENST00000244302 BORCS6Q96GS4 357 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 FDXACB1Q9BRP7 624 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-201ENST00000244302 MMRN2Q9H8L6 949 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 XPNPEP3Q9NQH7 507 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 AKT3Q9Y243 479 aa14.14□□□□□ -0.15
HIF3A-201ENST00000244302 LAMA2P24043 3122 aaKnown RBP14.13□□□□□ -0.15
HIF3A-201ENST00000244302 LGALS16A8MUM7 142 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 HAS3O00219 553 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 TRIM49P0CI25 452 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 TRIM49CP0CI26 452 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 RARBP10826 455 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 CPT1AP50416 773 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 WNT7BP56706 349 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms