RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 KDM4CQ9H3R0 1056 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 MCM8Q9UJA3 840 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 DIS3Q9Y2L1 958 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 SLITRK3O94933 977 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 EYA4O95677 639 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 HLA-DOAP06340 250 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 GYS1P13807 737 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 FERP16591 822 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 FMO5P49326 533 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 JAG1P78504 1218 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 DHX9Q08211 1270 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 CTTNQ14247 550 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 ARHGAP44Q17R89 818 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 C1orf220Q5T0J3 134 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 MDM1Q8TC05 714 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 TMEM109Q9BVC6 243 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 THAP2Q9H0W7 228 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 PSME4Q14997 1843 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 DNAJC8O75937 253 aaPredicted RBP12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 RAD17O75943 681 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 GHRP10912 638 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 CYP2J2P51589 502 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 KCTD17Q8N5Z5 321 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 GLT8D2Q9H1C3 349 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 PABPC3Q9H361 631 aaKnown RBP12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.95□□□□□ -0.347e-23■■□□□ 13.7
SEC61A1-201ENST00000243253 PCYOX1Q9UHG3 505 aa12.95□□□□□ -0.34
SEC61A1-201ENST00000243253 PHF20L1A8MW92 1017 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 PIK3CDO00329 1044 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 GCNT3O95395 438 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 CYP1B1Q16678 543 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 OTOP1Q7RTM1 612 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 GLG1Q92896 1179 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 EIF2AK1Q9BQI3 630 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 MKNK1Q9BUB5 465 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 WDR18Q9BV38 432 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 ACTR5Q9H9F9 607 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 NYAP2Q9P242 653 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 DNM3Q9UQ16 869 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 LRRN2O75325 713 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 ZC2HC1CQ53FD0 456 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 CYB5D1Q6P9G0 228 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 PRELID2Q8N945 189 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 UBLCP1Q8WVY7 318 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 BHMT2Q9H2M3 363 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 HGSO14964 777 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 PSMD10O75832 226 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 BBOX1O75936 387 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 MMP10P09238 476 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 EEF2P13639 858 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 DRAP1Q14919 205 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 ZNF720Q7Z2F6 126 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 LMBR1Q8WVP7 490 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 PNMA2Q9UL42 364 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 ZNF536O15090 1300 aa12.94□□□□□ -0.34
SEC61A1-201ENST00000243253 SPDYE3A6NKU9 549 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 NMT1P30419 496 aaKnown RBP12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 EIF3BP55884 814 aaKnown RBP12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 MAPK7Q13164 816 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 TLDC1Q6P9B6 456 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 ARMC9Q7Z3E5 817 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 FAM84AQ96KN4 292 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 FMO2Q99518 471 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 MTA2O94776 668 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 STAT1P42224 750 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 MARCKSL1P49006 195 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 IRX3P78415 501 aaPredicted RBP12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 PRKG1Q13976 671 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 SLFN13Q68D06 897 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 BTNL9Q6UXG8 535 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 GMCL1P1Q8NEA9 526 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 CCDC26Q8TAB7 109 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 CRAMP1Q96RY5 1269 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 ANKRD63C9JTQ0 380 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 ASAP2O43150 1006 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 KIAA0754O94854 1291 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 GH2P01242 217 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 PPP2R5CQ13362 524 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 C11orf63Q6NUN7 778 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 RPAINQ86UA6 219 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 TAX1BP1Q86VP1 789 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 JAMLQ86YT9 394 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 SLC9A9Q8IVB4 645 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 DAW1Q8N136 415 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 FBXO25Q8TCJ0 367 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 KRT35Q92764 455 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 C18orf8Q96DM3 657 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 DPH5Q9H2P9 285 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms