RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 MAEAQ7L5Y9 396 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 ZNF598Q86UK7 904 aaKnown RBP11.77□□□□□ -0.53
PFDN5-201ENST00000243040 ECHDC2Q86YB7 292 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 CMTR2Q8IYT2 770 aaKnown RBP11.77□□□□□ -0.53
PFDN5-201ENST00000243040 DAW1Q8N136 415 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 FOXD4L4Q8WXT5 416 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-201ENST00000243040 BSNDQ8WZ55 320 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
PFDN5-201ENST00000243040 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 PRIMPOLQ96LW4 560 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 DRC1Q96MC2 740 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 CLIC6Q96NY7 704 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 TGS1Q96RS0 853 aaKnown RBP11.77□□□□□ -0.53
PFDN5-201ENST00000243040 CDX2Q99626 313 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-201ENST00000243040 RUSC1Q9BVN2 902 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 LRFN2Q9ULH4 789 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 ZDHHC9Q9Y397 364 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 PCDHB7Q9Y5E2 793 aa11.77□□□□□ -0.53
PFDN5-201ENST00000243040 TDRD15B5MCY1 1934 aaKnown RBP11.76□□□□□ -0.53
PFDN5-201ENST00000243040 LRRIQ4A6NIV6 560 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 INO80B-WBP1J3KQ70 363 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 HOXA2O43364 376 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 TSPAN1O60635 241 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 ERLIN2O94905 339 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 EOMESO95936 686 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 LINC00271P0C7V0 271 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 SKIP12755 728 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 ATF7P17544 494 aaPredicted RBP11.76□□□□□ -0.53
PFDN5-201ENST00000243040 HOXA11P31270 313 aaPredicted RBP11.76□□□□□ -0.53
PFDN5-201ENST00000243040 TXLNAP40222 546 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 RAB27AP51159 221 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 FAM187BQ17R55 369 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 TWF2Q6IBS0 349 aaKnown RBP11.76□□□□□ -0.53
PFDN5-201ENST00000243040 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 ZBTB8OSQ8IWT0 167 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 KCNG4Q8TDN1 519 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 RSPH1Q8WYR4 309 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 LARP4BQ92615 738 aaKnown RBP11.76□□□□□ -0.53
PFDN5-201ENST00000243040 RAD54LQ92698 747 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
PFDN5-201ENST00000243040 CCDC51Q96ER9 411 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 IFT74Q96LB3 600 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 PLIN2Q99541 437 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 C17orf75Q9HAS0 396 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 FAM105AQ9NUU6 356 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 PRMT7Q9NVM4 692 aaPredicted RBP11.76□□□□□ -0.53
PFDN5-201ENST00000243040 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
PFDN5-201ENST00000243040 STK17AQ9UEE5 414 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 CCDC39Q9UFE4 941 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 CFAP45Q9UL16 551 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 STXBP5LQ9Y2K9 1186 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 COL6A3P12111 3177 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 EYSQ5T1H1 3165 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 PLXNA4Q9HCM2 1894 aa11.76□□□□□ -0.53
PFDN5-201ENST00000243040 ZNF623O75123 536 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 HIP1RO75146 1068 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 DDIT3P35638 169 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 DNM1Q05193 864 aaKnown RBP11.75□□□□□ -0.53
PFDN5-201ENST00000243040 SPECC1Q5M775 1068 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 NOTUMQ6P988 496 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 SPRED2Q7Z698 418 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 FIBCD1Q8N539 461 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 MYLIPQ8WY64 445 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 KCNN1Q92952 543 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 CCDC113Q9H0I3 377 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 FZD8Q9H461 694 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 PRDM12Q9H4Q4 367 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 RNF19AQ9NV58 838 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
PFDN5-201ENST00000243040 ODF2LQ9ULJ1 636 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 RWDD3Q9Y3V2 267 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 PHLPP2Q6ZVD8 1323 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 CNTNAP2Q9UHC6 1331 aa11.75□□□□□ -0.53
PFDN5-201ENST00000243040 EPOPA6NHQ4 379 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 C5orf67F2Z3F1 127 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 CUTAO60888 179 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 SSBP05455 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
PFDN5-201ENST00000243040 ARF4P18085 180 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-201ENST00000243040 POU3F3P20264 500 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-201ENST00000243040 EFNA5P52803 228 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 DMP1Q13316 513 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-201ENST00000243040 BTG3Q14201 252 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-201ENST00000243040 MCM6Q14566 821 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 MAPK6Q16659 721 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 NAALADL2Q58DX5 795 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 ARSHQ5FYA8 562 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 UBXN11Q5T124 520 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 AXDND1Q5T1B0 1012 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-201ENST00000243040 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 DEPTORQ8TB45 409 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 ARNTL2Q8WYA1 636 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 GAS2L1Q99501 681 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-201ENST00000243040 C17orf80Q9BSJ5 609 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 TMEM117Q9H0C3 514 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 ARHGAP28Q9P2N2 729 aa11.74□□□□□ -0.53
PFDN5-201ENST00000243040 ATP6V1DQ9Y5K8 247 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms