RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 KCNK3O14649 394 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 GMPSP49915 693 aaPredicted RBP17.56■□□□□ 0.4
UBE3D-201ENST00000237186 TNNC1P63316 161 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 PPP3CAQ08209 521 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 PLS1Q14651 629 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 SAMD7Q7Z3H4 446 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 RASGEF1CQ8N431 466 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 EIF1ADQ8N9N8 165 aaKnown RBP17.56■□□□□ 0.4
UBE3D-201ENST00000237186 RDH13Q8NBN7 331 aa17.56■□□□□ 0.4
UBE3D-201ENST00000237186 NTPCRQ9BSD7 190 aaKnown RBP17.56■□□□□ 0.4
UBE3D-201ENST00000237186 MOV10L1Q9BXT6 1211 aaKnown RBP17.56■□□□□ 0.4
UBE3D-201ENST00000237186 CNOT7Q9UIV1 285 aaKnown RBP17.56■□□□□ 0.4
UBE3D-201ENST00000237186 FZD9O00144 591 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 RNF40O75150 1001 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 GLI1P08151 1106 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 CCND2P30279 289 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 DLG4P78352 724 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 PPATQ06203 517 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 BAATQ14032 418 aaPredicted RBP17.55■□□□□ 0.4
UBE3D-201ENST00000237186 SND1Q7KZF4 910 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBE3D-201ENST00000237186 GLYCTKQ8IVS8 523 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBE3D-201ENST00000237186 RFFLQ8WZ73 363 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 HES6Q96HZ4 224 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
UBE3D-201ENST00000237186 C17orf75Q9HAS0 396 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 RNF146Q9NTX7 359 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 EMSYQ7Z589 1322 aa17.55■□□□□ 0.4
UBE3D-201ENST00000237186 FOXN3O00409 490 aaPredicted RBP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 ATP2A1O14983 1001 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 NR3C2P08235 984 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 DSG3P32926 999 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 GGCXP38435 758 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 PEX3P56589 373 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TCEAL1Q15170 157 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 NSMFQ6X4W1 530 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 PEX26Q7Z412 305 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 NLRX1Q86UT6 975 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 NT5DC3Q86UY8 548 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 MAP4K3Q8IVH8 894 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 METTL13Q8N6R0 699 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 SPIRE2Q8WWL2 714 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 GDAP1L1Q96MZ0 367 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 PCIF1Q9H4Z3 704 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TCEAL9Q9UHQ7 104 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 EXOC7Q9UPT5 735 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 RIPK3Q9Y572 518 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 PCDHA10Q9Y5I2 948 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 ANKRD62A6NC57 917 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 GOLGA6BA6NDN3 693 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TISP43B9A030 160 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 C19orf81C9J6K1 198 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 DKC1O60832 514 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 HEXIM1O94992 359 aaKnown RBP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 PTPRAP18433 802 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 SMTNP53814 917 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 HADHBP55084 474 aaKnown RBP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 MRPS25P82663 173 aaKnown RBP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TBC1D10BQ4KMP7 808 aaPredicted RBP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 XKR9Q5GH70 373 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TAF3Q5VWG9 929 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 ALS2CLQ60I27 953 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 ANO5Q75V66 913 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 DNAAF5Q86Y56 855 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TMEM161BQ8NDZ6 487 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 CTNNBL1Q8WYA6 563 aaPredicted RBP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 KRT12Q99456 494 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TTC7AQ9ULT0 858 aaPredicted RBP17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TBX20Q9UMR3 447 aa17.54■□□□□ 0.4
UBE3D-201ENST00000237186 TESPA1A2RU30 521 aaPredicted RBP17.53■□□□□ 0.4
UBE3D-201ENST00000237186 BHMG1C9JSJ3 638 aaPredicted RBP17.53■□□□□ 0.4
UBE3D-201ENST00000237186 TNFAIP3P21580 790 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 DNA2P51530 1060 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 ENPEPQ07075 957 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 OTUD6AQ7L8S5 288 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 SLC35G2Q8TBE7 412 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 PLEKHO2Q8TD55 490 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 WNK4Q96J92 1243 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 AGPAT1Q99943 283 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 SH3GL2Q99962 352 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 HINFPQ9BQA5 517 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 GPRC5CQ9NQ84 441 aa17.53■□□□□ 0.4
UBE3D-201ENST00000237186 ZNF214Q9UL59 606 aaPredicted RBP17.53■□□□□ 0.4
UBE3D-201ENST00000237186 DIS3Q9Y2L1 958 aaKnown RBP17.53■□□□□ 0.4
UBE3D-201ENST00000237186 CCDC188H7C350 402 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.4
UBE3D-201ENST00000237186 SLC16A4O15374 487 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 STBD1O95210 358 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 ADSSP30520 456 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 GCLMP48507 274 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 PAK2Q13177 524 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 MREGQ8N565 214 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 NSUN6Q8TEA1 469 aaKnown RBP17.52■□□□□ 0.4
UBE3D-201ENST00000237186 KIFAP3Q92845 792 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 GOLPH3Q9H4A6 298 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 FAM204AQ9H8W3 233 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 EPB41L5Q9HCM4 733 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 UBE2TQ9NPD8 197 aaPredicted RBP17.52■□□□□ 0.4
UBE3D-201ENST00000237186 PICK1Q9NRD5 415 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms