RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 COL4A4P53420 1690 aaPredicted RBP17.12■□□□□ 0.33
APOA1-201ENST00000236850 TBKBP1A7MCY6 615 aa17.11■□□□□ 0.33
APOA1-201ENST00000236850 CSDE1O75534 798 aaKnown RBP17.11■□□□□ 0.33
APOA1-201ENST00000236850 ERLIN2O94905 339 aa17.11■□□□□ 0.33
APOA1-201ENST00000236850 FGFR4P22455 802 aa17.11■□□□□ 0.33
APOA1-201ENST00000236850 PTENP60484 403 aa17.11■□□□□ 0.33
APOA1-201ENST00000236850 ATP2C1P98194 919 aaPredicted RBP17.11■□□□□ 0.33
APOA1-201ENST00000236850 KCTD17Q8N5Z5 321 aa17.11■□□□□ 0.33
APOA1-201ENST00000236850 ZSCAN16Q9H4T2 348 aaPredicted RBP17.11■□□□□ 0.33
APOA1-201ENST00000236850 XPNPEP1Q9NQW7 623 aa17.11■□□□□ 0.33
APOA1-201ENST00000236850 COG5Q9UP83 839 aa17.11■□□□□ 0.33
APOA1-201ENST00000236850 MRPL42Q9Y6G3 142 aaKnown RBP17.11■□□□□ 0.33
APOA1-201ENST00000236850 NCOR1O75376 2440 aa17.11■□□□□ 0.33
APOA1-201ENST00000236850 EYSQ5T1H1 3165 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 CARNS1A5YM72 827 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
APOA1-201ENST00000236850 AXLP30530 894 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 ARL2P36404 184 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 FAM102BQ5T8I3 360 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 PADI6Q6TGC4 694 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
APOA1-201ENST00000236850 SNX29Q8TEQ0 813 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
APOA1-201ENST00000236850 PGBD4Q96DM1 585 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 MRPL9Q9BYD2 267 aaKnown RBP17.1■□□□□ 0.33
APOA1-201ENST00000236850 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 AGPAT5Q9NUQ2 364 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 DNM3Q9UQ16 869 aa17.1■□□□□ 0.33
APOA1-201ENST00000236850 ZNF623O75123 536 aa17.09■□□□□ 0.33
APOA1-201ENST00000236850 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
APOA1-201ENST00000236850 MRPS5P82675 430 aaKnown RBP17.09■□□□□ 0.33
APOA1-201ENST00000236850 LRRC43Q8N309 656 aa17.09■□□□□ 0.33
APOA1-201ENST00000236850 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
APOA1-201ENST00000236850 PPP2R3CQ969Q6 453 aa17.09■□□□□ 0.33
APOA1-201ENST00000236850 CCDC51Q96ER9 411 aa17.09■□□□□ 0.33
APOA1-201ENST00000236850 POLR3FQ9H1D9 316 aaPredicted RBP17.09■□□□□ 0.33
APOA1-201ENST00000236850 KIAA1024Q9UPX6 916 aa17.09■□□□□ 0.33
APOA1-201ENST00000236850 INO80B-WBP1J3KQ70 363 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 SLC26A4O43511 780 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 NCK2O43639 380 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 FGFR1P11362 822 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 LAG3P18627 525 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 CYP11B2P19099 503 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 GATMP50440 423 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 PPP2R5AQ15172 486 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.32
APOA1-201ENST00000236850 CNNM3Q8NE01 707 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 HLA-CQ95604 372 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 CHAMP1Q96JM3 812 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 NT5C3AQ9H0P0 336 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 FAM105AQ9NUU6 356 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 DDX19AQ9NUU7 478 aaKnown RBP17.08■□□□□ 0.32
APOA1-201ENST00000236850 PLAGL2Q9UPG8 496 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 TCHHQ07283 1943 aa17.08■□□□□ 0.32
APOA1-201ENST00000236850 A0A087WWV3 80 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 GLRA2P23416 452 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 UBE3AQ05086 875 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 CAPSQ13938 189 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 TJAP1Q5JTD0 557 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 NOTUMQ6P988 496 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 GLB1LQ6UWU2 654 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 ZBTB8OSQ8IWT0 167 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 HACE1Q8IYU2 909 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 ASAP3Q8TDY4 903 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 KIFAP3Q92845 792 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 IFT74Q96LB3 600 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 AK8Q96MA6 479 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 CASD1Q96PB1 797 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 BHMT2Q9H2M3 363 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 NSUN3Q9H649 340 aaKnown RBP17.07■□□□□ 0.32
APOA1-201ENST00000236850 MINDY3Q9H8M7 445 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 TYW1Q9NV66 732 aaKnown RBP17.07■□□□□ 0.32
APOA1-201ENST00000236850 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
APOA1-201ENST00000236850 TTC28Q96AY4 2481 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 CNTNAP2Q9UHC6 1331 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 VWA3AA6NCI4 1184 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 LRRIQ4A6NIV6 560 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 EYA4O95677 639 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 PPM1AP35813 382 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 MAEAQ7L5Y9 396 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 KLHL23Q8NBE8 558 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 UBN1Q9NPG3 1134 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 PUF60Q9UHX1 559 aaKnown RBP17.06■□□□□ 0.32
APOA1-201ENST00000236850 PCDHB2Q9Y5E7 798 aa17.06■□□□□ 0.32
APOA1-201ENST00000236850 GRM6O15303 877 aa17.05■□□□□ 0.32
APOA1-201ENST00000236850 ITGB1P05556 798 aa17.05■□□□□ 0.32
APOA1-201ENST00000236850 NCLP19338 710 aaKnown RBP17.05■□□□□ 0.32
APOA1-201ENST00000236850 HOXA11P31270 313 aaPredicted RBP17.05■□□□□ 0.32
APOA1-201ENST00000236850 CEBPZQ03701 1054 aaKnown RBP17.05■□□□□ 0.32
APOA1-201ENST00000236850 DNM1Q05193 864 aaKnown RBP17.05■□□□□ 0.32
APOA1-201ENST00000236850 CLLU1OSQ5K130 101 aa17.05■□□□□ 0.32
APOA1-201ENST00000236850 THNSL1Q8IYQ7 743 aa17.05■□□□□ 0.32
APOA1-201ENST00000236850 COLGALT1Q8NBJ5 622 aa17.05■□□□□ 0.32
APOA1-201ENST00000236850 SPPL3Q8TCT6 385 aa17.05■□□□□ 0.32
APOA1-201ENST00000236850 HELQQ8TDG4 1101 aa17.05■□□□□ 0.32
APOA1-201ENST00000236850 ZNF396Q96N95 335 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms