RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PDE2AO00408 941 aaPredicted RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 LAD1O00515 517 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 KRT3P12035 628 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 SERPINB10P48595 397 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 RASGRF1Q13972 1273 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TRIP13Q15645 432 aaPredicted RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TMEM63BQ5T3F8 832 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 KRT25Q7Z3Z0 450 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 RFWD2Q8NHY2 731 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 EPS8L3Q8TE67 593 aaKnown RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 GIPC3Q8TF64 312 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TRPV6Q9H1D0 765 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 ARHGEF38Q9NXL2 777 aa13.72□□□□□ -0.21
VAMP4-201ENST00000236192 CNOT7Q9UIV1 285 aaKnown RBP13.72□□□□□ -0.21
VAMP4-201ENST00000236192 TBKBP1A7MCY6 615 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 A8MUI8 341 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 SMAPO00193 183 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 TNFAIP8O95379 198 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 RPL5P46777 297 aaKnown RBP13.71□□□□□ -0.21
VAMP4-201ENST00000236192 ST3GAL1Q11201 340 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 SFR1Q86XK3 245 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 SNF8Q96H20 258 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 SLC12A4Q9UP95 1085 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 ZNF839A8K0R7 811 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 ZBBXA8MT70 800 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 PPP1R3GB7ZBB8 358 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 PDLIM1O00151 329 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 TOM1O60784 492 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 UPP2O95045 317 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 FSCBQ5H9T9 825 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 CDKAL1Q5VV42 579 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 RHOT2Q8IXI1 618 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 SKA1Q96BD8 255 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 TUBGCP5Q96RT8 1024 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 MAST3O60307 1309 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
VAMP4-201ENST00000236192 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 CHN2P52757 468 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 EXOSC10Q01780 885 aaKnown RBP13.71□□□□□ -0.21
VAMP4-201ENST00000236192 ART3Q13508 389 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 CCDC14Q49A88 953 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 FAM83BQ5T0W9 1011 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 FRA10AC1Q70Z53 315 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 TMC3Q7Z5M5 1100 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 MAGEB6Q8N7X4 407 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 TSSK1BQ9BXA7 367 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 SAR1AQ9NR31 198 aa13.71□□□□□ -0.21
VAMP4-201ENST00000236192 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 hCG_1642624A0A1W2PR95 340 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 ANKRD33BA6NCL7 494 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 E9PMD0 336 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 EYA2O00167 538 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 CDC27P30260 824 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 DNAJC3Q13217 504 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 NONOQ15233 471 aaKnown RBP eCLIP13.71□□□□□ -0.22
VAMP4-201ENST00000236192 TBCCQ15814 346 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 SLC18A3Q16572 532 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 ASAP3Q8TDY4 903 aa13.71□□□□□ -0.22
VAMP4-201ENST00000236192 SYCE1LA8MT33 242 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 PRDM1O75626 825 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 APOA1P02647 267 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 ANO7Q6IWH7 933 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 CLEC4GQ6UXB4 293 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 LRRC6Q86X45 466 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 CCDC124Q96CT7 223 aaKnown RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 AK8Q96MA6 479 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 KIFC3Q9BVG8 833 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 SPATA16Q9BXB7 569 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 DISC1Q9NRI5 854 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 BARX2Q9UMQ3 279 aaPredicted RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 WDR19Q8NEZ3 1342 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 GOLGA8CPA6NN73 597 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 IFNB1P01574 187 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 USPL1Q5W0Q7 1092 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 ARL6IP4Q66PJ3 421 aaKnown RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 NXNQ6DKJ4 435 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 CFAP36Q96G28 342 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 DDX50Q9BQ39 737 aaKnown RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 PCDH18Q9HCL0 1135 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 RPS6KL1Q9Y6S9 549 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 ZSCAN5CA6NGD5 496 aaPredicted RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 CFLARO15519 480 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 PHF2O75151 1096 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 LDHAP00338 332 aaKnown RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 RBM44Q6ZP01 1051 aaKnown RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 JAMLQ86YT9 394 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 OMA1Q96E52 524 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 CELF4Q9BZC1 486 aaKnown RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
VAMP4-201ENST00000236192 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 USP11P51784 963 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 IGBP1P78318 339 aa13.7□□□□□ -0.22
VAMP4-201ENST00000236192 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms