RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TIPINQ9BVW5 301 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 BHMT2Q9H2M3 363 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
SF3B6-201ENST00000233468 ZSCAN20P17040 1043 aaPredicted RBP12.51□□□□□ -0.41
SF3B6-201ENST00000233468 CYP11B2P19099 503 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 CDC25AP30304 524 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 PHKA2P46019 1235 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 DEFB103AP81534 67 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 POU5F1BQ06416 359 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 NFX1Q12986 1120 aaKnown RBP12.51□□□□□ -0.41
SF3B6-201ENST00000233468 PPP2R5AQ15172 486 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 FAM102BQ5T8I3 360 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 KIFAP3Q92845 792 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 TMEM143Q96AN5 459 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 IFT74Q96LB3 600 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 MMTAG2Q9BU76 263 aaKnown RBP12.51□□□□□ -0.41
SF3B6-201ENST00000233468 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 CSRNP2Q9H175 543 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 ADAMTS10Q9H324 1103 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
SF3B6-201ENST00000233468 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
SF3B6-201ENST00000233468 PADI3Q9ULW8 664 aa12.51□□□□□ -0.41
SF3B6-201ENST00000233468 DENND3A2RUS2 1198 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 LPXNO60711 386 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 DARSP14868 501 aaKnown RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 POU3F3P20264 500 aaPredicted RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 CD52P31358 61 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 ME1P48163 572 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 LAMTOR4Q0VGL1 99 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 GRB10Q13322 594 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 PKP1Q13835 747 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 FOXD4L6Q3SYB3 417 aaPredicted RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 FOXD4L3Q6VB84 417 aaPredicted RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 CCDC73Q6ZRK6 1079 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 SRGAP1Q7Z6B7 1085 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 NLRP4Q96MN2 994 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 PPP1R16BQ96T49 567 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 ZBED2Q9BTP6 218 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 SCAND2PQ9GZW5 306 aaPredicted RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 C1orf112Q9NSG2 853 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 ST3GAL5Q9UNP4 418 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 NOC2LQ9Y3T9 749 aaKnown RBP12.5□□□□□ -0.41
SF3B6-201ENST00000233468 SIP14410 1827 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
SF3B6-201ENST00000233468 PHLPP2Q6ZVD8 1323 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 A0A087WZ62 844 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 E9PMD0 336 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 TLL1O43897 1013 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 CUTAO60888 179 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 SSBP05455 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
SF3B6-201ENST00000233468 PLA2G4BP0C869 781 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 STAG3L1P0CL83 205 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 SRGAP2CP0DJJ0 459 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 ARL2P36404 184 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 DNM1Q05193 864 aaKnown RBP12.49□□□□□ -0.41
SF3B6-201ENST00000233468 DRP2Q13474 957 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 ECM1Q16610 540 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 TMEM119Q4V9L6 283 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 ZBTB8OSQ8IWT0 167 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 SYT2Q8N9I0 419 aaPredicted RBP12.49□□□□□ -0.41
SF3B6-201ENST00000233468 RNF149Q8NC42 400 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 DRC1Q96MC2 740 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 FDXACB1Q9BRP7 624 aaPredicted RBP12.49□□□□□ -0.41
SF3B6-201ENST00000233468 NFKBIZQ9BYH8 718 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
SF3B6-201ENST00000233468 C2orf40Q9H1Z8 148 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 AGO3Q9H9G7 860 aaKnown RBP12.49□□□□□ -0.41
SF3B6-201ENST00000233468 C17orf75Q9HAS0 396 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 XPNPEP1Q9NQW7 623 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 CHST12Q9NRB3 414 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 FAM13BQ9NYF5 915 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 STK17AQ9UEE5 414 aa12.49□□□□□ -0.41
SF3B6-201ENST00000233468 C5orf42Q9H799 3197 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 A0A087WWV3 80 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 GUCY2CP25092 1073 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 DDIT3P35638 169 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 KARSQ15046 597 aaKnown RBP12.48□□□□□ -0.41
SF3B6-201ENST00000233468 MAEAQ7L5Y9 396 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 CATSPER4Q7RTX7 472 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 FAM228AQ86W67 206 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 MYOCDQ8IZQ8 938 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 GDPD5Q8WTR4 605 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 SPATA32Q96LK8 384 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 CLIC6Q96NY7 704 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 PNMA5Q96PV4 448 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 LRRC27Q9C0I9 530 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 ERVK-5Q9HDB9 667 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 MTUS1Q9ULD2 1270 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 LRFN2Q9ULH4 789 aa12.48□□□□□ -0.41
SF3B6-201ENST00000233468 ENPP3O14638 875 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 ERLIN2O94905 339 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms