RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ITGB3BPQ13352 177 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 EPC2Q52LR7 807 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 SAMD1Q6SPF0 538 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 C4orf19Q8IY42 314 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 SYTL5Q8TDW5 730 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 PIK3R5Q8WYR1 880 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 ARL8AQ96BM9 186 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 GOLPH3Q9H4A6 298 aa23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 ZNF277Q9NRM2 450 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-201ENST00000225742 EMSYQ7Z589 1322 aa23.81■■□□□ 1.4
SMARCD2-201ENST00000225742 NFIBO00712 420 aa23.81■■□□□ 1.4
SMARCD2-201ENST00000225742 FDX1P10109 184 aa23.81■■□□□ 1.4
SMARCD2-201ENST00000225742 CDAN1Q8IWY9 1227 aa23.81■■□□□ 1.4
SMARCD2-201ENST00000225742 HVCN1Q96D96 273 aa23.81■■□□□ 1.4
SMARCD2-201ENST00000225742 CARD9Q9H257 536 aa23.81■■□□□ 1.4
SMARCD2-201ENST00000225742 SLC38A10Q9HBR0 1119 aa23.81■■□□□ 1.4
SMARCD2-201ENST00000225742 ANKEF1Q9NU02 776 aa23.81■■□□□ 1.4
SMARCD2-201ENST00000225742 PHF20L1A8MW92 1017 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 SFNP31947 248 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 GUCY2FP51841 1108 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 MTMR1Q13613 665 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 DNAAF5Q86Y56 855 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 IL31RAQ8NI17 732 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 SEC14L1Q92503 715 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 EXOC7Q9UPT5 735 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 RRP15Q9Y3B9 282 aaKnown RBP23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 ZNF233A6NK53 670 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 FOXN3O00409 490 aaPredicted RBP23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 DDX3YO15523 660 aaKnown RBP23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 NCKAP1LP55160 1127 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 HLTFQ14527 1009 aaKnown RBP eCLIP23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 PLS1Q14651 629 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 ARHGAP44Q17R89 818 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 XRRA1Q6P2D8 792 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 RDM1Q8NG50 284 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 FAM114A2Q9NRY5 505 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 HSPBP1Q9NZL4 362 aa23.8■■□□□ 1.4
SMARCD2-201ENST00000225742 HMGB1P1B2RPK0 211 aaPredicted RBP23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 EIF3HO15372 352 aaKnown RBP eCLIP23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 ECHS1P30084 290 aa23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 YWHABP31946 246 aaKnown RBP23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 PSMC5P62195 406 aa23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 MRPS9P82933 396 aaKnown RBP23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 MTMR3Q13615 1198 aa23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 C11orf63Q6NUN7 778 aa23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 KDM7AQ6ZMT4 941 aa23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 HAUS6Q7Z4H7 955 aa23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 AP1M1Q9BXS5 423 aa23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 UBE2TQ9NPD8 197 aaPredicted RBP23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 SAMM50Q9Y512 469 aa23.79■■□□□ 1.4
SMARCD2-201ENST00000225742 ALAS1P13196 640 aa23.78■■□□□ 1.4
SMARCD2-201ENST00000225742 KRT76Q01546 638 aa23.78■■□□□ 1.4
SMARCD2-201ENST00000225742 RDH13Q8NBN7 331 aa23.78■■□□□ 1.4
SMARCD2-201ENST00000225742 OSGEPQ9NPF4 335 aa23.78■■□□□ 1.4
SMARCD2-201ENST00000225742 PKD2L1Q9P0L9 805 aa23.78■■□□□ 1.4
SMARCD2-201ENST00000225742 MIF4GDA9UHW6 222 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 WNT10BO00744 389 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 GNGT1P63211 74 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 MORC4Q8TE76 937 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 FAM107BQ9H098 131 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 DDX47Q9H0S4 455 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 TCEAL9Q9UHQ7 104 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 PPP1R9AQ9ULJ8 1098 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 GOLGA6L10A0A0M3HER8 536 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 WDR64B1ANS9 1081 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 HSPA6P17066 643 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 RXRBP28702 533 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 PPP3CAQ08209 521 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 TNFAIP1Q13829 316 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 PGM5Q15124 567 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 DNAJC21Q5F1R6 531 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 FOXR1Q6PIV2 292 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 ATP6V1G3Q96LB4 118 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 CAMKK2Q96RR4 588 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 PCIF1Q9H4Z3 704 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 RSPH14Q9UHP6 348 aa23.77■■□□□ 1.4
SMARCD2-201ENST00000225742 IGSF9BQ9UPX0 1349 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 ZBED4O75132 1171 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 ABCB4P21439 1286 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 DLG4P78352 724 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 ENPEPQ07075 957 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 TRADDQ15628 312 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 SPDYCQ5MJ68 293 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 C1orf220Q5T0J3 134 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 ARHGEF26Q96DR7 871 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 CBWD1Q9BRT8 395 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 RAB17Q9H0T7 212 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 THAP2Q9H0W7 228 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 SEPT11Q9NVA2 429 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 PLAAQ9Y263 795 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 UTP11Q9Y3A2 253 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 CTDP1Q9Y5B0 961 aaPredicted RBP23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 ASTN2O75129 1339 aaPredicted RBP23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 EP400Q96L91 3159 aa23.76■■□□□ 1.39
SMARCD2-201ENST00000225742 GOLGA6L10A6NI86 522 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 MYO1CO00159 1063 aa23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 CTNND1O60716 968 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-201ENST00000225742 RTN2O75298 545 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms