RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 ITGA4P13612 1032 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 TATDN1Q6P1N9 297 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 RNF207Q6ZRF8 634 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 STMN4Q9H169 189 aaPredicted RBP16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 HSPBP1Q9NZL4 362 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 ECM29Q5VYK3 1845 aa16.14■□□□□ 0.17
UBE2D4-201ENST00000222402 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 SLCO1A2P46721 670 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 MARSP56192 900 aaKnown RBP16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 EFCAB13Q8IY85 973 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 RTKN2Q8IZC4 609 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 ISCUQ9H1K1 167 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 LCMT1Q9UIC8 334 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 DENND3A2RUS2 1198 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 CYP26A1O43174 497 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 YWHABP31946 246 aaKnown RBP16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 NPEPPSP55786 919 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 CBWD1Q9BRT8 395 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 SUCLA2Q9P2R7 463 aaPredicted RBP16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 TMEM253P0C7T8 217 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 CBWD6Q4V339 395 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 CBWD3Q5JTY5 395 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 CBWD5Q5RIA9 395 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 PLA2G4FQ68DD2 849 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 ZNF365Q70YC5 407 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 CAVIN3Q969G5 261 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 VTI1AQ96AJ9 217 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 GPRC5CQ9NQ84 441 aa16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 FEZ2Q9UHY8 353 aaPredicted RBP16.13■□□□□ 0.17
UBE2D4-201ENST00000222402 MAGEA9P43362 315 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 ASTE1Q2TB18 679 aaPredicted RBP16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 C1orf186Q6ZWK4 172 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 RIT2Q99578 217 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 TBC1D22BQ9NU19 505 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 A0A087WUV0 522 aaPredicted RBP16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 LRRIQ4A6NIV6 560 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 WDR64B1ANS9 1081 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 ATMINO43313 823 aaPredicted RBP16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 TRADDQ15628 312 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 RBM46Q8TBY0 533 aaKnown RBP16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 PAIP2Q9BPZ3 127 aaKnown RBP16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 KCND2Q9NZV8 630 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 PARP2Q9UGN5 583 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 VAV3Q9UKW4 847 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 RBAK-RBAKDNI3L0D1 243 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 NFIBO00712 420 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 TGFB1I1O43294 461 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 MAPK4P31152 587 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 ANKS4BQ8N8V4 417 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 MGARPQ8TDB4 240 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 ATP6V0A1Q93050 837 aa16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.12■□□□□ 0.17
UBE2D4-201ENST00000222402 MAGOHP61326 146 aaKnown RBP16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 ERVK-9P63128 1117 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 SEPT7Q16181 437 aaKnown RBP16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 INPP4AQ96PE3 977 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 HSD17B14Q9BPX1 270 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 ANKFY1Q9P2R3 1169 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 ALG6Q9Y672 507 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 SYNGAP1Q96PV0 1343 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 GTPBP10A4D1E9 387 aaKnown RBP16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 MIF4GDA9UHW6 222 aaKnown RBP16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 TISP43B9A030 160 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 MYO1FO00160 1098 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 NEFHP12036 1026 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 NOVP48745 357 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 SPP2Q13103 211 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 RASA3Q14644 834 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 MTERF2Q49AM1 385 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 LIN9Q5TKA1 542 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 KCTD17Q8N5Z5 321 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 GLG1Q92896 1179 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 KIFC3Q9BVG8 833 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 PASKQ96RG2 1323 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 PSMD10O75832 226 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 CYP3A4P08684 503 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 HSD17B3P37058 310 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 SEC24CP53992 1094 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 POLGP54098 1239 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 DEPTORQ8TB45 409 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 SAMD15Q9P1V8 674 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 TMEM150BA6NC51 233 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 EDIL3O43854 480 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 PPP1R37O75864 691 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 IFNAR2P48551 515 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 ZNF564Q8TBZ8 553 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 ACTRT1Q8TDG2 376 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 SLC20A1Q8WUM9 679 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 NUP85Q9BW27 656 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 MRIQ9BWK5 157 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 INTUQ9ULD6 942 aa16.11■□□□□ 0.17
UBE2D4-201ENST00000222402 GAS8O95995 478 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 PLS3P13797 630 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms