RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 PDCD2LQ9BRP1 358 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 AGPAT3Q9NRZ7 376 aa10.85□□□□□ -0.67
USP11-201ENST00000218348 DHX15O43143 795 aaKnown RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 GNA14O95837 355 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 CALCAP01258 141 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 HSD17B4P51659 736 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 CNTN2Q02246 1040 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 LLGL1Q15334 1064 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 EDRF1Q3B7T1 1238 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 FIGNQ5HY92 759 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 GBP6Q6ZN66 633 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 CYFIP1Q7L576 1253 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 REPS2Q8NFH8 660 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 U2AF1L4Q8WU68 220 aaKnown RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 TRAF3IP3Q9Y228 551 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 FRMD4BQ9Y2L6 1034 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 ZMYM2Q9UBW7 1377 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 N4BP1O75113 896 aaKnown RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 NEBLO76041 1014 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 SLC10A3P09131 477 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 QARSP47897 775 aaKnown RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 IREB2P48200 963 aaKnown RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 TTLL12Q14166 644 aaPredicted RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 KLHDC7AQ5VTJ3 777 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 IQCEQ6IPM2 695 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 SWSAP1Q6NVH7 229 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 SEPT14Q6ZU15 432 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 MCF2L2Q86YR7 1114 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 PTPN18Q99952 460 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 GANQ9H2C0 597 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 R3HDMLQ9H3Y0 253 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 GABBR1Q9UBS5 961 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 MAFGO15525 162 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 ECEL1O95672 775 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 SERPING1P05155 500 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 P4HBP07237 508 aaKnown RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 NR3C2P08235 984 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 PSMC2P35998 433 aaKnown RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 RARRES1P49788 294 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 TMEM132BQ14DG7 1078 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 WHAMMP3Q1A5X7 153 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 LMBRD2Q68DH5 695 aaPredicted RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 ZNF746Q6NUN9 644 aaPredicted RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 NLRX1Q86UT6 975 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 PXMP2Q9NR77 195 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.84□□□□□ -0.67
USP11-201ENST00000218348 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
USP11-201ENST00000218348 MAPK7Q13164 816 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 SPRYD7Q5W111 196 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 ERO1BQ86YB8 467 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 GLYCTKQ8IVS8 523 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 LPAR1Q92633 364 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 OPTNQ96CV9 577 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 THOC1Q96FV9 657 aaKnown RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 FIZ1Q96SL8 496 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 PPP1R12BO60237 982 aaPredicted RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 HARSP12081 509 aaKnown RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 SKIDA1Q1XH10 827 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 FRMD5Q7Z6J6 570 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 ADAT2Q7Z6V5 191 aaKnown RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 KAT5Q92993 513 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 CCDC102AQ96A19 550 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 CCDC97Q96F63 343 aaPredicted RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 CEP170P1Q96L14 293 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 ALS2CR12Q96Q35 445 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 ELP3Q9H9T3 547 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 MYO1AQ9UBC5 1043 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 FAM184BQ9ULE4 1060 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 RRP15Q9Y3B9 282 aaKnown RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 ESYT3A0FGR9 886 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 ZBTB48P10074 688 aaPredicted RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 GAP43P17677 238 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 MTERF2Q49AM1 385 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 GADL1Q6ZQY3 521 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 HAUS6Q7Z4H7 955 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 NOX5Q96PH1 765 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 PDE11AQ9HCR9 933 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 TOPORSQ9NS56 1045 aaPredicted RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 LARSQ9P2J5 1176 aaKnown RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
USP11-201ENST00000218348 DNAJC12Q9UKB3 198 aa10.83□□□□□ -0.68
USP11-201ENST00000218348 ZRANB2O95218 330 aaKnown RBP eCLIP10.82□□□□□ -0.68
USP11-201ENST00000218348 DLATP10515 647 aaKnown RBP10.82□□□□□ -0.68
USP11-201ENST00000218348 OAS2P29728 719 aaKnown RBP10.82□□□□□ -0.68
USP11-201ENST00000218348 DRAP1Q14919 205 aaPredicted RBP10.82□□□□□ -0.68
USP11-201ENST00000218348 ZSCAN26Q16670 478 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 TREML2Q5T2D2 321 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 LBX2Q6XYB7 198 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 PHLDB2Q86SQ0 1253 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 EHBP1Q8NDI1 1231 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 TRIM58Q8NG06 486 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 OSBPL9Q96SU4 736 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 RIT2Q99578 217 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 FRMPD4Q14CM0 1322 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 EMSYQ7Z589 1322 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 ZSCAN5CA6NGD5 496 aaPredicted RBP10.82□□□□□ -0.68
USP11-201ENST00000218348 TMEM88BA6NKF7 163 aa10.82□□□□□ -0.68
USP11-201ENST00000218348 MYBL2P10244 700 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms