RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 GMCL1P1Q8NEA9 526 aa13.3□□□□□ -0.28
TM9SF4-201ENST00000217315 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
TM9SF4-201ENST00000217315 GPRC5CQ9NQ84 441 aa13.3□□□□□ -0.28
TM9SF4-201ENST00000217315 HOMER3Q9NSC5 361 aa13.3□□□□□ -0.28
TM9SF4-201ENST00000217315 PIM2Q9P1W9 311 aa13.3□□□□□ -0.28
TM9SF4-201ENST00000217315 TMX2Q9Y320 296 aa13.3□□□□□ -0.28
TM9SF4-201ENST00000217315 LRP6O75581 1613 aa13.3□□□□□ -0.28
TM9SF4-201ENST00000217315 MAP2K7O14733 419 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 TMEM191BP0C7N4 346 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 COPB2P35606 906 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 OSTNP61366 133 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 PRAMEF18Q5VWM3 479 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 CYP4F22Q6NT55 531 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 CCDC91Q7Z6B0 441 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 ZBTB33Q86T24 672 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 ZNF564Q8TBZ8 553 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 BAP1Q92560 729 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 RIT2Q99578 217 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 KIFC3Q9BVG8 833 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 NUP85Q9BW27 656 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 HEMGNQ9BXL5 484 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 KCNMB3Q9NPA1 279 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 NRBP2Q9NSY0 501 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 SYNGAP1Q96PV0 1343 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 FOXN3O00409 490 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 GLI1P08151 1106 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 PNMA8AQ86V59 439 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 ZBTB8OSQ8IWT0 167 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 TPCN2Q8NHX9 752 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 SLC30A5Q8TAD4 765 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 MAK16Q9BXY0 300 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 IQCGQ9H095 443 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 RAB20Q9NX57 234 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 PCDHA10Q9Y5I2 948 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 PKD1L3Q7Z443 1732 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 INO80B-WBP1J3KQ70 363 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 M0R2N6 131 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 TRIM66O15016 1216 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 ZBTB7AO95365 584 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 ACSL3O95573 720 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 MAGOHP61326 146 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 RPS6P62753 249 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 TFAMQ00059 246 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 MCPH1Q8NEM0 835 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 NSUN6Q8TEA1 469 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 SLITRK6Q9H5Y7 841 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 ZNF263O14978 683 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 SNHG28P0DPA3 235 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 MARK3P27448 753 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 HMGCS2P54868 508 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 SLC35C1Q96A29 364 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 ATP6V1G3Q96LB4 118 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 CBWD1Q9BRT8 395 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 OSGEPQ9NPF4 335 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 PSD3Q9NYI0 1048 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 AIPL1Q9NZN9 384 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 FAM169AQ9Y6X4 670 aa13.29□□□□□ -0.28
TM9SF4-201ENST00000217315 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 NFIBO00712 420 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 FANCGO15287 622 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 SLITRK3O94933 977 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 SRGAP2CP0DJJ0 459 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 SFNP31947 248 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 SSTR3P32745 418 aaPredicted RBP13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 IGBP1P78318 339 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 LACTBP83111 547 aaPredicted RBP13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 ZNF720Q7Z2F6 126 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 FBXL13Q8NEE6 735 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 GRK7Q8WTQ7 553 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 RUNDC3BQ96NL0 473 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 NXF1Q9UBU9 619 aaKnown RBP13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 COL14A1Q05707 1796 aaKnown RBP13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 STX2P32856 288 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 CAP2P40123 477 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 IRAK1P51617 712 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 MKL1Q969V6 931 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 ARL8AQ96BM9 186 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 TAAR1Q96RJ0 339 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 C11orf70Q9BRQ4 267 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 MSTO1Q9BUK6 570 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 THAP2Q9H0W7 228 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 TBK1Q9UHD2 729 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 GOLGA8SH3BPF8 625 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 PLS3P13797 630 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 GPATCH11Q8N954 259 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 KCND2Q9NZV8 630 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 ALG6Q9Y672 507 aa13.28□□□□□ -0.28
TM9SF4-201ENST00000217315 RASGRF2O14827 1237 aa13.27□□□□□ -0.28
TM9SF4-201ENST00000217315 MYBL2P10244 700 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms