RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 ARIH2O95376 493 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 P4HBP07237 508 aaKnown RBP13.49□□□□□ -0.25
SNU13-201ENST00000215956 MMP3P08254 477 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 ATP1A3P13637 1013 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 GAP43P17677 238 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 RBL2Q08999 1139 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 TCTN1Q2MV58 587 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 FAM26FQ5R3K3 315 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 B3GNT9Q6UX72 402 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 KCNK18Q7Z418 384 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 VSIG10LQ86VR7 867 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 UNC45AQ9H3U1 944 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 ZSWIM4Q9H7M6 989 aa13.49□□□□□ -0.25
SNU13-201ENST00000215956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNU13-201ENST00000215956 MYO7AQ13402 2215 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 GRXCR2A6NFK2 248 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 ZNF500O60304 480 aaPredicted RBP13.48□□□□□ -0.25
SNU13-201ENST00000215956 EFCAB14O75071 495 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 CKBP12277 381 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 MRPS9P82933 396 aaKnown RBP13.48□□□□□ -0.25
SNU13-201ENST00000215956 COASYQ13057 564 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 STXBP4Q6ZWJ1 553 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 TMC6Q7Z403 805 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 TPH2Q8IWU9 490 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 MYOCDQ8IZQ8 938 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 AFG1LQ8WV93 481 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 DNAJC19Q96DA6 116 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 DYDC2Q96IM9 177 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 LIMA1Q9UHB6 759 aaKnown RBP13.48□□□□□ -0.25
SNU13-201ENST00000215956 COL4A3BPQ9Y5P4 624 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 NFASCO94856 1347 aa13.48□□□□□ -0.25
SNU13-201ENST00000215956 A0A1B0GTH6 734 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 FRMD3A2A2Y4 597 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 WDR64B1ANS9 1081 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 EML1O00423 815 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 CHMP2AO43633 222 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 SLITRK3O94933 977 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 LYPLA2O95372 231 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 TPM1P09493 284 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 NHLH1Q02575 133 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 EHHADHQ08426 723 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 STK4Q13043 487 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 STXBP2Q15833 593 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 ZNF746Q6NUN9 644 aaPredicted RBP13.47□□□□□ -0.25
SNU13-201ENST00000215956 FAM117BQ6P1L5 589 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 SMAP1Q8IYB5 467 aaPredicted RBP13.47□□□□□ -0.25
SNU13-201ENST00000215956 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 FBXO22Q8NEZ5 403 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 KAT2BQ92831 832 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
SNU13-201ENST00000215956 SENP7Q9BQF6 1050 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 TIPINQ9BVW5 301 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
SNU13-201ENST00000215956 SEL1LQ9UBV2 794 aa13.47□□□□□ -0.25
SNU13-201ENST00000215956 ATG2AQ2TAZ0 1938 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 LRRC10BA6NIK2 292 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 KCNJ18B7U540 433 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 DCXO43602 365 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 SFPQP23246 707 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNU13-201ENST00000215956 CLCN1P35523 988 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 CYP4A11Q02928 519 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 TRIM14Q14142 442 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 IKBKEQ14164 716 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 KCNJ12Q14500 433 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 PUS10Q3MIT2 529 aaKnown RBP13.46□□□□□ -0.25
SNU13-201ENST00000215956 HERC4Q5GLZ8 1057 aaPredicted RBP13.46□□□□□ -0.25
SNU13-201ENST00000215956 CENPPQ6IPU0 288 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 TTI2Q6NXR4 508 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 CCDC62Q6P9F0 684 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 FILIP1Q7Z7B0 1213 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 CCDC112Q8NEF3 446 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 IL31RAQ8NI17 732 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 UBE2Q2Q8WVN8 375 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 CCDC43Q96MW1 224 aaKnown RBP13.46□□□□□ -0.25
SNU13-201ENST00000215956 C17orf80Q9BSJ5 609 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 BHMT2Q9H2M3 363 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 SLC39A2Q9NP94 309 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 DBR1Q9UK59 544 aaKnown RBP13.46□□□□□ -0.25
SNU13-201ENST00000215956 ODF2LQ9ULJ1 636 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 SAMM50Q9Y512 469 aa13.46□□□□□ -0.25
SNU13-201ENST00000215956 USP34Q70CQ2 3546 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 ARHGEF35A5YM69 484 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 EIF3JO75822 258 aaKnown RBP13.46□□□□□ -0.26
SNU13-201ENST00000215956 GH1P01241 217 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 QARSP47897 775 aaKnown RBP13.46□□□□□ -0.26
SNU13-201ENST00000215956 ARHGAP1Q07960 439 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 CTTNQ14247 550 aaKnown RBP13.46□□□□□ -0.26
SNU13-201ENST00000215956 NR1I3Q14994 352 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 TCP11X2Q5H9J9 407 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 LRRC8AQ8IWT6 810 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 KIAA0895Q8NCT3 520 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 MRPL38Q96DV4 380 aaKnown RBP13.46□□□□□ -0.26
SNU13-201ENST00000215956 MED15Q96RN5 788 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 LXNQ9BS40 222 aa13.46□□□□□ -0.26
SNU13-201ENST00000215956 KCNH6Q9H252 994 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms