RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 UBXN2AP68543 259 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 AUHQ13825 339 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 CTTNQ14247 550 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 DRAP1Q14919 205 aaPredicted RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 SF3B3Q15393 1217 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 RBM26Q5T8P6 1007 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 DENND2CQ68D51 928 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 FAM47EQ6ZV65 393 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 PROM2Q8N271 834 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 PARD3BQ8TEW8 1205 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 LMBR1Q8WVP7 490 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 UTP4Q969X6 686 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 L3MBTL3Q96JM7 780 aaPredicted RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 TRIM7Q9C029 511 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 PABPC3Q9H361 631 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 RIOX1Q9H6W3 641 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 DDX4Q9NQI0 724 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 DAAM1Q9Y4D1 1078 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 A6NNZ2 444 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 G3V3G9 751 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 TGFB1I1O43294 461 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 CHMP2AO43633 222 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 NR3C1P04150 777 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 SPATA31C1P0DKV0 1188 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 PYGMP11217 842 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 GM2AP17900 193 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 VCAM1P19320 739 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 HOXA13P31271 388 aaPredicted RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 PTGIRP43119 386 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 CACNB3P54284 484 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 MTM1Q13496 603 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 CNGA2Q16280 664 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 TUBB8Q3ZCM7 444 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 USH1GQ495M9 461 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 KIAA1755Q5JYT7 1200 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 DCAF8Q5TAQ9 597 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 NUGGCQ68CJ6 796 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 GALNT17Q6IS24 598 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 C1orf131Q8NDD1 294 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 NEK9Q8TD19 979 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 TRIM6Q9C030 488 aaPredicted RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 ZCWPW1Q9H0M4 648 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 SUCLA2Q9P2R7 463 aaPredicted RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 GGA2Q9UJY4 613 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 TRPC6Q9Y210 931 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 C15orf41Q9Y2V0 281 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 NUMBLQ9Y6R0 609 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 ABCB11O95342 1321 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 ZMYM2Q9UBW7 1377 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 ADAMTSL1Q8N6G6 1762 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 TMEM120BA0PK00 339 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 FAM86B1E9PN63 330 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 EML1O00423 815 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 FAM86B2P0C5J1 330 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 DLATP10515 647 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 DRP2Q13474 957 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 TRAPPC3LQ5T215 181 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 PHLDB3Q6NSJ2 640 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 C16orf86Q6ZW13 317 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 SLC30A5Q8TAD4 765 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 MICAL1Q8TDZ2 1067 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 C1orf54Q8WWF1 131 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 MRRFQ96E11 262 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 YIPF3Q9GZM5 350 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 DHX36Q9H2U1 1008 aaKnown RBP6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 EBF2Q9HAK2 575 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 AAASQ9NRG9 546 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 AMFRQ9UKV5 643 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 PCDHA3Q9Y5H8 950 aa6.3□□□□□ -1.4
CEACAM1-201ENST00000161559 TNRC6CQ9HCJ0 1690 aaKnown RBP6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 H0Y3Z8 333 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 O00370 1275 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 FOXN3O00409 490 aaPredicted RBP6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 MPHOSPH10O00566 681 aaKnown RBP6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 RIPK2O43353 540 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 SNX3O60493 162 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 FLOT1O75955 427 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 SSTR3P32745 418 aaPredicted RBP6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 RHBDL3P58872 404 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 EN1Q05925 392 aaPredicted RBP6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 PPATQ06203 517 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 SPIRE1Q08AE8 756 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 MAPK7Q13164 816 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 PDIA5Q14554 519 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 MESDQ14696 234 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 KNOP1Q1ED39 458 aaKnown RBP6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 THEMIS2Q5TEJ8 643 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 VSTM1Q6UX27 236 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 NBPF5PQ86XG9 351 aaPredicted RBP6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 KIAA0825Q8IV33 1275 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 ZFPM1Q8IX07 1006 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 CCDC65Q8IXS2 484 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 NEDD1Q8NHV4 660 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 CCDC26Q8TAB7 109 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 ZBTB10Q96DT7 871 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 CEP63Q96MT8 703 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 EDEM3Q9BZQ6 932 aa6.29□□□□□ -1.4
CEACAM1-201ENST00000161559 PIDD1Q9HB75 910 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms