RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 ZNF564Q8TBZ8 553 aaPredicted RBP13.36□□□□□ -0.27
LMCD1-201ENST00000157600 ATP6V1G3Q96LB4 118 aa13.36□□□□□ -0.27
LMCD1-201ENST00000157600 HNRNPRO43390 633 aaKnown RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 PEX3P56589 373 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 STAT4Q14765 748 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 CXorf38Q8TB03 319 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 ASPSCR1Q9BZE9 553 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 SAYSD1Q9NPB0 183 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 SUCLA2Q9P2R7 463 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 ZFP69BQ9UJL9 534 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 SSU72P8A0A1W2PR75 194 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 SNX2O60749 519 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 P4HBP07237 508 aaKnown RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 PSMC5P62195 406 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 GPIHBP1Q8IV16 184 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 DACT3Q96B18 629 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 DDX50Q9BQ39 737 aaKnown RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 UBN2Q6ZU65 1347 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 LRRC53A6NM62 1247 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 STXBP3O00186 592 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 MCUQ8NE86 351 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 PIGBQ92521 554 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 PRCPP42785 496 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 DUOXA2Q1HG44 320 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 HEATR6Q6AI08 1181 aaKnown RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 NLRP4Q96MN2 994 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 PCIF1Q9H4Z3 704 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 GPBP1L1Q9HC44 474 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 PSMD3O43242 534 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 SEC31AO94979 1220 aaKnown RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 PMS2P54278 862 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 TMEM47Q9BQJ4 181 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 RECQLP46063 649 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 HDAC4P56524 1084 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 CIAPIN1Q6FI81 312 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 C4orf22Q6V702 233 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 FRMD8Q9BZ67 464 aaPredicted RBP13.35□□□□□ -0.27
LMCD1-201ENST00000157600 UVRAGQ9P2Y5 699 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 PRKAG2Q9UGJ0 569 aa13.35□□□□□ -0.27
LMCD1-201ENST00000157600 MEIS1O00470 390 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 TBX3O15119 743 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 PRKAB2O43741 272 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 CYP27A1Q02318 531 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 ANO5Q75V66 913 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 CCDC24Q8N4L8 307 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 ZMYND10O75800 440 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 ZNF18P17022 549 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 ELF1P32519 619 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 P3H1Q32P28 736 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 LRRC8BQ6P9F7 803 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 RIBC1Q8N443 379 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 GTF3C2Q8WUA4 911 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 SOX5P35711 763 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 FAM133BQ5BKY9 247 aaKnown RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 TRMT10CQ7L0Y3 403 aaKnown RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 ELMOD1Q8N336 334 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 RYBPQ8N488 228 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 UHMK1Q8TAS1 419 aaKnown RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 ATP1A3P13637 1013 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 SLC16A2P36021 539 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 GPC3P51654 580 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 DYNC1I2Q13409 638 aaKnown RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 COG1Q8WTW3 980 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 AP1M1Q9BXS5 423 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 CRB1P82279 1406 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 GDF11O95390 407 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 CHGBP05060 677 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 SERPINB10P48595 397 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 KIF19Q2TAC6 998 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 URGCPQ8TCY9 931 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 PIH1D3Q9NQM4 214 aaKnown RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 TTC19Q6DKK2 380 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 GDAP1Q8TB36 358 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 LPAR1Q92633 364 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 DCP1AQ9NPI6 582 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 BFARQ9NZS9 450 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 GNA15P30679 374 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 UGP2Q16851 508 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 EDRF1Q3B7T1 1238 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 MYLK4Q86YV6 388 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-201ENST00000157600 APOL6Q9BWW8 343 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 TRIM54Q9BYV2 358 aa13.34□□□□□ -0.27
LMCD1-201ENST00000157600 RTN2O75298 545 aa13.33□□□□□ -0.27
LMCD1-201ENST00000157600 CD58P19256 250 aa13.33□□□□□ -0.27
LMCD1-201ENST00000157600 OCA2Q04671 838 aa13.33□□□□□ -0.27
LMCD1-201ENST00000157600 KRT35Q92764 455 aa13.33□□□□□ -0.27
LMCD1-201ENST00000157600 ZWILCHQ9H900 591 aa13.33□□□□□ -0.27
LMCD1-201ENST00000157600 NGRNQ9NPE2 291 aaKnown RBP13.33□□□□□ -0.27
LMCD1-201ENST00000157600 MYH6P13533 1939 aa13.33□□□□□ -0.27
LMCD1-201ENST00000157600 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 YWHAHQ04917 246 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-201ENST00000157600 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms