RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PDIA5Q14554 519 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 PPM1KQ8N3J5 372 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 ATP8B4Q8TF62 1192 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 PPP1R12CQ9BZL4 782 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 MTMR4Q9NYA4 1195 aa18.05■□□□□ 0.48
CTDP1-201ENST00000075430 CLDN3O15551 220 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 CFBP00751 764 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 QRICH1Q2TAL8 776 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 GNPTABQ3T906 1256 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 TMEM119Q4V9L6 283 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 ZBTB10Q96DT7 871 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 RTFDC1Q9BY42 306 aaPredicted RBP18.04■□□□□ 0.48
CTDP1-201ENST00000075430 SLITRK6Q9H5Y7 841 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 PCNTO95613 3336 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
CTDP1-201ENST00000075430 POC1B-GALNT4F8VUJ3 575 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 GDF11O95390 407 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 RPL13P26373 211 aaKnown RBP18.04■□□□□ 0.48
CTDP1-201ENST00000075430 PCK1P35558 622 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 SEL1L2Q5TEA6 688 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 NSRP1Q9H0G5 558 aaKnown RBP18.04■□□□□ 0.48
CTDP1-201ENST00000075430 INTUQ9ULD6 942 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 USTQ9Y2C2 406 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 ITGB4P16144 1822 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
CTDP1-201ENST00000075430 COMTP21964 271 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 TTC27Q6P3X3 843 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 SLF2Q8IX21 1173 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 BRAFP15056 766 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 LLGL2Q6P1M3 1020 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 ALG13Q9NP73 1137 aaKnown RBP18.03■□□□□ 0.48
CTDP1-201ENST00000075430 MYH3P11055 1940 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 PNMA6FA0A0J9YX94 578 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 PPIP5K2O43314 1243 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 PYGMP11217 842 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 RFFLQ8WZ73 363 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 SPOCK2Q92563 424 aa18.03■□□□□ 0.48
CTDP1-201ENST00000075430 SYN2Q92777 582 aaPredicted RBP18.03■□□□□ 0.48
CTDP1-201ENST00000075430 CNOT10Q9H9A5 744 aaKnown RBP18.03■□□□□ 0.48
CTDP1-201ENST00000075430 SUCLA2Q9P2R7 463 aaPredicted RBP18.03■□□□□ 0.48
CTDP1-201ENST00000075430 ATP2B4P23634 1241 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 HOXD13P35453 343 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 EPHA7Q15375 998 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 TAF11Q15544 211 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 TBC1D16Q8TBP0 767 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 LRRC4BQ9NT99 713 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 TRPC6Q9Y210 931 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 RABGAP1Q9Y3P9 1069 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 DAGLAQ9Y4D2 1042 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 SOX5P35711 763 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 MAPK7Q13164 816 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 XRCC4Q13426 336 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 ODR4Q5SWX8 454 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 HS2ST1Q7LGA3 356 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 TTC7AQ9ULT0 858 aaPredicted RBP18.02■□□□□ 0.48
CTDP1-201ENST00000075430 PCDHAC2Q9Y5I4 1007 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 BZW2Q9Y6E2 419 aaKnown RBP18.02■□□□□ 0.48
CTDP1-201ENST00000075430 CNTNAP4Q9C0A0 1308 aa18.02■□□□□ 0.48
CTDP1-201ENST00000075430 KIAA0391O15091 583 aaKnown RBP18.02■□□□□ 0.47
CTDP1-201ENST00000075430 THAP12O43422 761 aa18.02■□□□□ 0.47
CTDP1-201ENST00000075430 FERP16591 822 aa18.02■□□□□ 0.47
CTDP1-201ENST00000075430 BIRC2Q13490 618 aa18.02■□□□□ 0.47
CTDP1-201ENST00000075430 TMED2Q15363 201 aa18.02■□□□□ 0.47
CTDP1-201ENST00000075430 RPUSD2Q8IZ73 545 aaKnown RBP18.02■□□□□ 0.47
CTDP1-201ENST00000075430 KLHL11Q9NVR0 708 aa18.02■□□□□ 0.47
CTDP1-201ENST00000075430 HLA-DOAP06340 250 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 NQO1P15559 274 aaKnown RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 TARSP26639 723 aaKnown RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 ARHGAP4P98171 946 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 DRP2Q13474 957 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 CALR3Q96L12 384 aaKnown RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 RMDN2Q96LZ7 410 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 FRMD4BQ9Y2L6 1034 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 SUN1O94901 812 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 ADCY8P40145 1251 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 DLG4P78352 724 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 LACTBP83111 547 aaPredicted RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 PLCB4Q15147 1175 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 EXOC3L1Q86VI1 746 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 FAM178BQ8IXR5 827 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 PRELID2Q8N945 189 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 ERMNQ8TAM6 284 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 ZNF317Q96PQ6 595 aaPredicted RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 TGS1Q96RS0 853 aaKnown RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 EME2A4GXA9 379 aaPredicted RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 NEFHP12036 1026 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 KAZNQ674X7 775 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 C16orf86Q6ZW13 317 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 SUPT20HQ8NEM7 779 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 NOP53Q9NZM5 478 aaKnown RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 SERPINB13Q9UIV8 391 aa18.01■□□□□ 0.47
CTDP1-201ENST00000075430 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.01■□□□□ 0.47
CTDP1-201ENST00000075430 EML1O00423 815 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 CHKAP35790 457 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 DNAJC3Q13217 504 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 SEPT12Q8IYM1 358 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 ZDHHC14Q8IZN3 488 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 UBL4BQ8N7F7 174 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 ZSWIM2Q8NEG5 633 aa18■□□□□ 0.47
CTDP1-201ENST00000075430 ZCWPW1Q9H0M4 648 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms