RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 VPS36Q86VN1 386 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 RPAP3Q9H6T3 665 aaPredicted RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 AGO4Q9HCK5 861 aaKnown RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 RGS17Q9UGC6 210 aaPredicted RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 PLAAQ9Y263 795 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 EMSYQ7Z589 1322 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 MYO1FO00160 1098 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 FOXN3O00409 490 aaPredicted RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 VCAM1P19320 739 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 YWHABP31946 246 aaKnown RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 SOX5P35711 763 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 TNIP1Q15025 636 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 ZNF746Q6NUN9 644 aaPredicted RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 B3GNT9Q6UX72 402 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 STXBP4Q6ZWJ1 553 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 PEX26Q7Z412 305 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 KAT5Q92993 513 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 CCDC127Q96BQ5 260 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 ATG4CQ96DT6 458 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 RIT2Q99578 217 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 UBE2TQ9NPD8 197 aaPredicted RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 BZW2Q9Y6E2 419 aaKnown RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 PPP3CAQ08209 521 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 BFSP1Q12934 665 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 TPCN2Q8NHX9 752 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 TEPSINQ96N21 525 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 INPP4AQ96PE3 977 aaPredicted RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 TRIM31Q9BZY9 425 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 LARSQ9P2J5 1176 aaKnown RBP14.24□□□□□ -0.13
CTNS-201ENST00000046640 ODF2LQ9ULJ1 636 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 USP20Q9Y2K6 914 aa14.24□□□□□ -0.13
CTNS-201ENST00000046640 IGSF9BQ9UPX0 1349 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 KIF4AO95239 1232 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 NR1D1P20393 614 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 QARSP47897 775 aaKnown RBP14.23□□□□□ -0.13
CTNS-201ENST00000046640 MNAT1P51948 309 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 PRPF4BQ13523 1007 aaKnown RBP14.23□□□□□ -0.13
CTNS-201ENST00000046640 XKR9Q5GH70 373 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 SLC20A1Q8WUM9 679 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 PIK3R5Q8WYR1 880 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 CAVIN3Q969G5 261 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 SAAL1Q96ER3 474 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 POP1Q99575 1024 aaKnown RBP14.23□□□□□ -0.13
CTNS-201ENST00000046640 DDX47Q9H0S4 455 aaKnown RBP14.23□□□□□ -0.13
CTNS-201ENST00000046640 TSKSQ9UJT2 592 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 E7EVH7 732 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 PEX10O60683 326 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 KIAA0754O94854 1291 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 ITGA4P13612 1032 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 GUCY2CP25092 1073 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 LSP1P33241 339 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 BAATQ14032 418 aaPredicted RBP14.23□□□□□ -0.13
CTNS-201ENST00000046640 PGM5Q15124 567 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 ARHGEF16Q5VV41 709 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 ZNF572Q7Z3I7 529 aaPredicted RBP14.23□□□□□ -0.13
CTNS-201ENST00000046640 ARHGEF19Q8IW93 802 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 OTUD6BQ8N6M0 293 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 METTL13Q8N6R0 699 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 GPR88Q9GZN0 384 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 GDF3Q9NR23 364 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 DMAC2Q9NW81 257 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
CTNS-201ENST00000046640 COL2A1P02458 1487 aaPredicted RBP14.23□□□□□ -0.13
CTNS-201ENST00000046640 ATP2C2O75185 946 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 CCNE2O96020 404 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 KRT13P13646 458 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 FERP16591 822 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 COPB2P35606 906 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 PRKCIP41743 596 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 ITIH3Q06033 890 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 ODF2Q5BJF6 829 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 RNF207Q6ZRF8 634 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 HAUS6Q7Z4H7 955 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 MICALL2Q8IY33 904 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 IQCKQ8N0W5 287 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 LRRC57Q8N9N7 239 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 SLC35G2Q8TBE7 412 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 STK33Q9BYT3 514 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 DEFB129Q9H1M3 183 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 TAOK3Q9H2K8 898 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 SLC38A10Q9HBR0 1119 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 SEL1LQ9UBV2 794 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 APEX2Q9UBZ4 518 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 WDR46O15213 610 aaKnown RBP14.22□□□□□ -0.13
CTNS-201ENST00000046640 FKBP1CQ5VVH2 108 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 USP38Q8NB14 1042 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 UBLCP1Q8WVY7 318 aaPredicted RBP14.22□□□□□ -0.13
CTNS-201ENST00000046640 ARHGEF26Q96DR7 871 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 THAP2Q9H0W7 228 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 HACL1Q9UJ83 578 aa14.22□□□□□ -0.13
CTNS-201ENST00000046640 TMEM110-MUSTN1A8MSY1 372 aa14.21□□□□□ -0.13
CTNS-201ENST00000046640 TNFAIP3P21580 790 aa14.21□□□□□ -0.13
CTNS-201ENST00000046640 TMOD1P28289 359 aa14.21□□□□□ -0.13
CTNS-201ENST00000046640 IFT88Q13099 833 aa14.21□□□□□ -0.13
CTNS-201ENST00000046640 MCF2L2Q86YR7 1114 aa14.21□□□□□ -0.13
CTNS-201ENST00000046640 PLEKHO2Q8TD55 490 aa14.21□□□□□ -0.13
CTNS-201ENST00000046640 UBIAD1Q9Y5Z9 338 aa14.21□□□□□ -0.13
CTNS-201ENST00000046640 BUB1BO60566 1050 aaPredicted RBP14.21□□□□□ -0.13
CTNS-201ENST00000046640 PLA2G6O60733 806 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms