RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 DTNAQ9Y4J8 743 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 IQCMA0A1B0GVH7 501 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 STXBP3O00186 592 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 ACSL3O95573 720 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 MYL3P08590 195 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 GUCY1A3Q02108 690 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 KRT39Q6A163 491 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 TBC1D19Q8N5T2 526 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 C2orf69Q8N8R5 385 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 ZNF804BA4D1E1 1349 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 A0A087WUV0 522 aaPredicted RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 GYG2O15488 501 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 SCGNO76038 276 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 PLEKHA8Q96JA3 519 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 KIFC1Q9BW19 673 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 HAUS4Q9H6D7 363 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 LMBRD1Q9NUN5 540 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 CLIC2O15247 247 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 EPHB4P54760 987 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 C1orf146Q5VVC0 180 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 BRD8Q9H0E9 1235 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 NR2F2P24468 414 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 COPB1P53618 953 aaKnown RBP13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 NAALADL2Q58DX5 795 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 C6orf118Q5T5N4 469 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 SLFN12LQ6IEE8 588 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 FMO2Q99518 471 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 PLEKHA5Q9HAU0 1116 aa13.14□□□□□ -0.31
HS3ST1-201ENST00000002596 ITGA3P26006 1051 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 FAM26FQ5R3K3 315 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 UBE2TQ9NPD8 197 aaPredicted RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 COPRSQ9NQ92 184 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 CD58P19256 250 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 ATXN3P54252 364 aaPredicted RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 TAS2R42Q7RTR8 314 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 KLHL25Q9H0H3 589 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 PCDHA5Q9Y5H7 936 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 GOLGA8MH3BSY2 632 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 PTPN21Q16825 1174 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 DDI2Q5TDH0 399 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 GFPT2O94808 682 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 ZBED1O96006 694 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 CASP14P31944 242 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 DDX50Q9BQ39 737 aaKnown RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 TRIM54Q9BYV2 358 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 PCDHGB4Q9UN71 923 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 MEFVO15553 781 aaPredicted RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 MARK3P27448 753 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 G2E3Q7L622 706 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 KDELC2Q7Z4H8 507 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 FAM167BQ9BTA0 163 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 GON4LQ3T8J9 2241 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 MYO1DO94832 1006 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 GSPT1P15170 499 aaKnown RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 BCAMP50895 628 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 UBXN2AP68543 259 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 DHX9Q08211 1270 aaKnown RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 TAF8Q7Z7C8 310 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 PDCD10Q9BUL8 212 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 TMEM63CQ9P1W3 806 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 ABCC12Q96J65 1359 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 MEIS1O00470 390 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 BIRC5O15392 142 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 P4HA2O15460 535 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 SERPINB10P48595 397 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 PSMC6P62333 389 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 CYGBQ8WWM9 190 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 ADAM21Q9UKJ8 722 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 CLIC4Q9Y696 253 aa13.13□□□□□ -0.31
HS3ST1-201ENST00000002596 SPATA1Q5VX52 437 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 CHSY1Q86X52 802 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 TUBGCP3Q96CW5 907 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 ATXN7L3BQ96GX2 97 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 TRIM62Q9BVG3 475 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 AP1M1Q9BXS5 423 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 ENO4A6NNW6 628 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 TJP3O95049 919 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 FTCDO95954 541 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 PYGMP11217 842 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 RBL2Q08999 1139 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 SMYD4Q8IYR2 804 aaPredicted RBP13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 ICA1LQ8NDH6 482 aa13.12□□□□□ -0.31
HS3ST1-201ENST00000002596 RIN3Q8TB24 985 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms