RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 PltpP55065 493 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Irf5P56477 497 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Olfm3P63056 478 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Fam92bQ3V2J0 292 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Avpr1aQ62463 423 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Usp50Q6P8X6 390 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Trim65Q8BFW4 522 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Svs3bQ8BZH8 265 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Spire2Q8K1S6 718 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Knl1Q66JQ7 1612 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Zfp850J3QPC5 689 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Rgs9O54828 675 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Hoxc10P31257 342 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Snap25P60879 206 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Krt80Q0VBK2 452 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 ItgaeQ60677 1167 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Hsph1Q61699 858 aaKnown RBP16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Tlr11Q6R5P0 926 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Trp53inp1Q9QXE4 239 aa16.51■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ccdc62E9PVD1 701 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 GfapP03995 430 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Eno3P21550 434 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Usp10P52479 792 aaKnown RBP16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Chp1P61022 195 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Tpd52Q62393 224 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Mcf2lQ64096 1149 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Mterf4Q8BVN4 346 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 SucoQ8C341 1250 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ltb4r2Q9JJL9 360 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Add1Q9QYC0 735 aaKnown RBP16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Shcbp1Q9Z179 668 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gm3182K7N6T8 263 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Odr4Q4PJX1 447 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ptk6Q64434 451 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Clec4gQ8BNX1 294 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Nudcd3Q8R1N4 363 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ing2Q9ESK4 281 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gm20721E9Q2U8 318 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 1700122O11RikJ3QPW6 241 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ptgs2Q05769 604 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Fam183bQ5NC57 135 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Creb3Q61817 404 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 PrcpQ7TMR0 491 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Lca5Q80ST9 704 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ccdc40Q8BI79 1192 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Mageb18Q8BQR7 327 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Serpina3bQ8BYY9 420 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Apol8A2VDH7 339 aaKnown RBP16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gm2237E9Q501 211 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gm3591K7N6X2 186 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 OatP29758 439 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 LmnaP48678 665 aaKnown RBP16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Psmc1P62192 440 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gcnt1Q09324 428 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 PrimpolQ6P1E7 537 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Atl2Q6PA06 583 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Tph2Q8CGV2 488 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Chn1Q91V57 459 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Setbp1Q9Z180 1582 aa16.5■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gm6370A0A0G2JGX9 315 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gm6309L7N481 315 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Stat3P42227 770 aaKnown RBP16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Asprv1Q09PK2 339 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Nsun7Q14AW5 724 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 LdhdQ7TNG8 484 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Olfr832Q7TRG9 312 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Unc45bQ8CGY6 931 aaKnown RBP16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 DtnaQ9D2N4 746 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gm32742A0A1B0GT42 1604 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Zfp266E9Q2S7 604 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Myl1P05977 188 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Arhgef16Q3U5C8 713 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Pum3Q8BKS9 647 aaKnown RBP16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Pgm1Q9D0F9 562 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Myoz2Q9JJW5 264 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Pard6bQ9JK83 371 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ino80Q6ZPV2 1559 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Fam129cD3YZB0 591 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Pid1Q3UBG2 217 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ephb1Q8CBF3 984 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ulbp1Q8HWA3 334 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Upb1Q8VC97 393 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ttc1Q91Z38 292 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ugp2Q91ZJ5 508 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Gm36028A0A0U1RPM1 299 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Zfp626A0A0U1RQ84 676 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Pdzd8B9EJ80 1147 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Srek1ip1Q4V9W2 153 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Ireb2Q811J3 963 aaKnown RBP16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 PdxkQ8K183 312 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Sdf4Q61112 361 aa16.49■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Pde9aO70628 534 aa16.48■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Slc4a1P04919 929 aa16.48■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Grin1P35438 938 aa16.48■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Slc9c1Q6UJY2 1175 aa16.48■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 PolrmtQ8BKF1 1207 aaKnown RBP16.48■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Snx2Q9CWK8 519 aa16.48■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Pabpc6Q9D4E6 643 aaKnown RBP16.48■□□□□ 0.23
Pcdha9-201ENSMUST00000115659 Pold3Q9EQ28 462 aa16.48■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 61.8 ms