RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 DgkkE9Q7N4 1118 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Usp17ldG5E8G2 545 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Usp17lcG5E8I7 545 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 ArP19091 899 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Prr7Q3V0I2 269 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ccdc84Q4VA36 332 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Nell2Q61220 819 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rusc1Q8BG26 893 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Unc5bQ8K1S3 945 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ccdc124Q9D8X2 217 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Astn1Q61137 1302 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Osbpl7A2A716 963 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gm4297D3YWB7 211 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ifi207E9Q3L4 978 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cyth3O08967 399 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ppp3caP63328 521 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gja5Q01231 358 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gga2Q6P5E6 603 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 SpopQ6ZWS8 374 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Q8BGD0 127 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Iffo1Q8BXL9 562 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mboat7Q8CHK3 473 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pop1Q8K205 1045 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Mipol1Q9D9F8 279 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Nup50Q9JIH2 466 aaKnown RBP10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 NagaQ9QWR8 415 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rnf4Q9QZS2 194 aa10.56□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rasal2E9PW37 1286 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Hoxa11P31311 313 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Trmt1Q3TX08 663 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rhox12Q4TU81 186 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ano5Q75UR0 904 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Peg10Q7TN75 958 aaKnown RBP10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Fbxo10Q7TQF2 950 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ppfia2Q8BSS9 1257 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rapgef5Q8C0Q9 814 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Usp20Q8C6M1 916 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Emilin2Q8K482 1074 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Trex1Q91XB0 314 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Grhl1Q921D9 618 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Q9DAQ4 598 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Myoz2Q9JJW5 264 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 SrcapA0A087WQ44 3271 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cdk14O35495 469 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Eif3dO70194 548 aaKnown RBP10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Miga1Q4QQM5 600 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tmem120aQ8C1E7 343 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Slc26a6Q8CIW6 758 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Champ1Q8K327 802 aaKnown RBP10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Znf830Q8R1N0 363 aaKnown RBP10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tdrd3Q91W18 743 aaKnown RBP10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ttc5Q99LG4 440 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cfap53Q9D439 514 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Slc16a2O70324 545 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Sorbs1Q62417 1290 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tmem132dQ76HP3 1097 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Daam2Q80U19 1115 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Enoph1Q8BGB7 257 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tor4aQ8BH02 426 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Lin9Q8C735 542 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pkn3Q8K045 878 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gle1Q8R322 699 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ccdc91Q9D8L5 442 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rasgrp1Q9Z1S3 795 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Serpinb6cW4VSP4 379 aa10.55□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cfap221A9Q751 836 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pdk4O70571 412 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Creb1Q01147 341 aaKnown RBP10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Gm10488Q4KL05 212 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 OgdhQ60597 1023 aaKnown RBP10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Adat2Q6P6J0 191 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Trim37Q6PCX9 961 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Pkn2Q8BWW9 983 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Atp2a1Q8R429 994 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Apbb1ipQ8R5A3 670 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tti1Q91V83 1085 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tom1l1Q923U0 474 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Calb1P12658 261 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Klra6Q60653 266 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Zbtb17Q60821 794 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rccd1Q8BTU7 377 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Fam118bQ8C569 351 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Proser2Q8C5R2 471 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cpb2Q9JHH6 422 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Krt17Q9QWL7 433 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Lactbl1S4R213 581 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Syngap1F6SEU4 1340 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Tbc1d16A2ABG4 766 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Zfp266E9Q2S7 604 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rad51bO35719 350 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Map2k1P31938 393 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Ppp1r1bQ60829 194 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 E2f7Q6S7F2 904 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Rassf6Q80UQ2 353 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Q8BGN9 141 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Epc2Q8C0I4 808 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Calhm6Q8C9E8 313 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Nemp2Q8CB65 421 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Med24Q99K74 987 aa10.54□□□□□ -0.72
Ccdc40-202ENSMUST00000053440 Cdca7Q9D0M2 382 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms