RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ddx4Q61496 702 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Drc7Q6V3W6 876 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Trmt13Q8BYH3 481 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pym1Q8CHP5 203 aaKnown RBP9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Frat2Q8K025 231 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 AagabQ8R2R3 316 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Atp2a1Q8R429 994 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tas1r3Q925D8 858 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Erp44Q9D1Q6 406 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tnfsf13bQ9WU72 309 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 A0A286YCQ6 122 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Krt28A6BLY7 462 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cyp2f2P33267 491 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Irf3P70671 419 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Dpcr1Q3TNW5 500 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 AcrbpQ3V140 540 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cd180Q62192 661 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Panx2Q6IMP4 677 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 NfrkbQ6PIJ4 1296 aaKnown RBP9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mindy1Q76LS9 468 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Arrdc3Q7TPQ9 414 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Nacc1Q7TSZ8 514 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Creb3l3Q91XE9 479 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Q9CYI0 393 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gm42715A0A087WP63 3095 aaKnown RBP9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 TroapB7ZNG4 668 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pdzrn4E9PUZ9 1014 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gimd1E9PW74 217 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ccdc191J3QQ27 883 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gucy1b3O54865 620 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Calb1P12658 261 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ptgs1P22437 602 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Serpinc1P32261 465 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cdkn1cP49919 348 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ppp3caP63328 521 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mcl1P97287 331 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Sec31aQ3UPL0 1230 aaKnown RBP9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 C6.1alQ7M757 291 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ctdp1Q7TSG2 960 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Grik4Q8BMF5 956 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Spata4Q8K3V1 295 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 CtsqQ91ZF4 343 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 CalcbQ99MP3 130 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fam217aQ9D9W6 419 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 B4galt5Q9JMK0 388 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 DgkhD3YXJ0 1156 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Zfp457L7N1X4 647 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Meis3P97368 378 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cyp11b1Q3TG86 501 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Asap3Q5U464 904 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 TfrcQ62351 763 aaKnown RBP9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Zbtb5Q7TQG0 670 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Leg1Q8C6C9 337 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ago2Q8CJG0 860 aaKnown RBP9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Trib2Q8K4K3 343 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 BrdtQ91Y44 956 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Arhgap8Q9CXP4 425 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cst12Q9DAN8 128 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fthl17aQ9DAX0 182 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fbxo16Q9QZM9 334 aa9.47□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gm45261A0A1B0GSP6 197 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mmrn2A6H6E2 943 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Sptlc1O35704 473 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 IkbkbO88351 757 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 PrkcbP68404 671 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 VegfaQ00731 214 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cdca2Q14B71 982 aaKnown RBP9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mphosph8Q3TYA6 858 aaKnown RBP9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ap5z1Q3U829 807 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mfhas1Q3V1N1 1048 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cyp2c29Q64458 490 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Asic3Q6X1Y6 530 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ints8Q80V86 995 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Zbed4Q80WQ9 1168 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Micall1Q8BGT6 870 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Oit3Q8R4V5 546 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pqbp1Q91VJ5 263 aaKnown RBP9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Slc12a9Q99MR3 914 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Klhl40Q9D783 621 aa9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Upf1Q9EPU0 1124 aaKnown RBP9.46□□□□□ -0.89
Trim39-201ENSMUST00000042717 Clca3bE9PUL3 1044 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Svs3aF2Z472 265 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Myo1aO88329 1043 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 DmpkP54265 631 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 SpoplQ2M2N2 392 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Rhox12Q4TU81 186 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Upb1Q8VC97 393 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 RragcQ99K70 398 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tbc1d15Q9CXF4 671 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Nol7Q9D7Z3 254 aaKnown RBP9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Rsph3bQ9DA80 389 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tpcn1Q9EQJ0 817 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 Taf1Q80UV9 1891 aa9.46□□□□□ -0.9
Trim39-201ENSMUST00000042717 AfmO89020 608 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 GcP21614 476 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Irf8P23611 424 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Pou3f3P31361 497 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 TxkP42682 527 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Tmod1P49813 359 aa9.45□□□□□ -0.9
Trim39-201ENSMUST00000042717 Gse1Q3U3C9 1213 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms