RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Col3a1P08121 1464 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Lrriq4A6H6A4 596 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rbm46P86049 533 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Pde1bQ01065 535 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Psmd5Q8BJY1 504 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Myef2Q8C854 591 aaKnown RBP12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Aldh18a1Q9Z110 795 aa12.14□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Aff1O88573 1216 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Wfs1P56695 890 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Zfp957Q3UT76 567 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Fbxo11Q7TPD1 930 aaKnown RBP12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Bcas3Q8CCN5 928 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rpap2Q8VC34 614 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tspyl1O88852 379 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Mybl2P48972 704 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Xxylt1Q3U4G3 392 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Fsd1lQ8BYN5 507 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Trim47Q8C0E3 641 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Lpgat1Q91YX5 370 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Pdxdc1Q99K01 787 aaKnown RBP12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Lpin2Q99PI5 893 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 EmcnQ9R0H2 261 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 HnrnpcQ9Z204 313 aaKnown RBP12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Adgra3Q7TT36 1310 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccdc110Q3V125 848 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ndufaf2Q59J78 168 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 HnrnpdQ60668 355 aaKnown RBP12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Kcnt1Q6ZPR4 1224 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Eif2aQ8BJW6 581 aaKnown RBP12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gimap5Q8BWF2 308 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Dennd1aQ8K382 1016 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Sytl1Q99N80 567 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cnot8Q9D8X5 292 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Oprl1P35377 367 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Flt3Q00342 1000 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Luc7l3Q5SUF2 432 aaKnown RBP12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 PodnQ7TQ62 611 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Wdr60Q8C761 999 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ginm1Q91WR6 327 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Mtmr4Q91XS1 1190 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Dnajc19Q9CQV7 116 aa12.13□□□□□ -0.47
Topbp1-201ENSMUST00000035164 4931408C20RikE9PWP9 1381 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cdr1E9Q0B4 517 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Casq2O09161 415 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Slurp2P0DP59 97 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tas2r134Q7TQB0 298 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tarsl2Q8BLY2 790 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 NkrfQ8BY02 690 aaKnown RBP12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Fbxl13Q8CDU4 790 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ddx60E9PZQ1 1711 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Fkbp1aP26883 108 aaKnown RBP12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Runx2Q08775 607 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ccdc125Q5U465 500 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ppp1r13bQ62415 1087 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ankrd23Q812A3 306 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gbp9Q8BTS3 619 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Agap1Q8BXK8 857 aaKnown RBP12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Anapc4Q91W96 807 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 NptxrQ99J85 493 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ecel1Q9JMI0 775 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 RpgrQ9R0X5 1001 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Mtmr7Q9Z2C9 660 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm7995L7N2E4 160 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 PtenO08586 403 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Slc27a2O35488 620 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 TxkP42682 527 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Abi2P62484 446 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 P4ha1Q60715 534 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 IgflQ6B9Z0 140 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 SrlQ7TQ48 910 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Onecut3Q8K557 490 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Vps36Q91XD6 386 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 1700018B08RikQ9DA83 213 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Olr1Q9EQ09 363 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 PrphP15331 475 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rgs9bpQ148R9 237 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 FdxrQ61578 494 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Kcnj11Q61743 390 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cnnm4Q69ZF7 771 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Rabep2Q91WG2 554 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Fkbp6Q91XW8 327 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 NelfcdQ922L6 591 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cttnbp2nlQ99LJ0 638 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 PpihQ9D868 188 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Cyp2s1Q9DBX6 501 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tns2Q8CGB6 1400 aa12.12□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ttll10A4Q9F3 704 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Apol7bB1AQP7 369 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 FaxcQ3UMF9 409 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Apol7eQ3UZ24 369 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Hipk4Q3V016 616 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Syne3Q4FZC9 975 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Ppp1r3gQ9CW07 347 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Lrrc34Q9DAM1 415 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Slit1Q80TR4 1531 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Gm5795E9PZN8 263 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Casp4P70343 373 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 AsnsQ61024 561 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Tmem132dQ76HP3 1097 aa12.11□□□□□ -0.47
Topbp1-201ENSMUST00000035164 Man2a2Q8BRK9 1152 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms