RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W EMG1Q06287 252 aaKnown RBP9.38□□□□□ -0.91
PRE6YOL038W SYO1Q07395 620 aa9.38□□□□□ -0.91
PRE6YOL038W NTG2Q08214 380 aa9.38□□□□□ -0.91
PRE6YOL038W ULA1Q12059 462 aa9.38□□□□□ -0.91
PRE6YOL038W DBP10Q12389 995 aaKnown RBP9.38□□□□□ -0.91
PRE6YOL038W YBL029C-AQ3E756 94 aa9.38□□□□□ -0.91
PRE6YOL038W Q0297Q9ZZV8 51 aa9.38□□□□□ -0.91
PRE6YOL038W RPL24AP04449 155 aaKnown RBP9.37□□□□□ -0.91
PRE6YOL038W DPH5P32469 300 aaPredicted RBP9.37□□□□□ -0.91
PRE6YOL038W ECM15P35195 104 aa9.37□□□□□ -0.91
PRE6YOL038W DIM1P41819 318 aaKnown RBP9.37□□□□□ -0.91
PRE6YOL038W YNR062CP53748 327 aa9.37□□□□□ -0.91
PRE6YOL038W YKR011CQ02209 353 aa9.37□□□□□ -0.91
PRE6YOL038W PEX12Q04370 399 aa9.37□□□□□ -0.91
PRE6YOL038W YPR147CQ06522 304 aaKnown RBP9.37□□□□□ -0.91
PRE6YOL038W COQ10Q08058 207 aa9.37□□□□□ -0.91
PRE6YOL038W HRT1Q08273 121 aa9.37□□□□□ -0.91
PRE6YOL038W NUF2P33895 451 aa9.36□□□□□ -0.91
PRE6YOL038W YKL077WP36081 392 aa9.36□□□□□ -0.91
PRE6YOL038W MRPL16P38064 232 aa9.36□□□□□ -0.91
PRE6YOL038W PDX3P38075 228 aaKnown RBP9.36□□□□□ -0.91
PRE6YOL038W RSM24Q03976 319 aa9.36□□□□□ -0.91
PRE6YOL038W HFD1Q04458 532 aa9.36□□□□□ -0.91
PRE6YOL038W MRPL1Q04599 285 aa9.36□□□□□ -0.91
PRE6YOL038W TMC1Q08422 150 aaPredicted RBP9.36□□□□□ -0.91
PRE6YOL038W NAB2P32505 525 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91 RIP-Chip
PRE6YOL038W TRS65P32893 560 aa9.35□□□□□ -0.91
PRE6YOL038W ILM1P47155 203 aa9.35□□□□□ -0.91
PRE6YOL038W BRR6P53062 197 aa9.35□□□□□ -0.91
PRE6YOL038W DSL1P53847 754 aa9.35□□□□□ -0.91
PRE6YOL038W HAS1Q03532 505 aaKnown RBP9.35□□□□□ -0.91
PRE6YOL038W SEC13Q04491 297 aaKnown RBP9.35□□□□□ -0.91
PRE6YOL038W YPR127WQ06494 345 aa9.35□□□□□ -0.91
PRE6YOL038W MED2Q12124 431 aa9.35□□□□□ -0.91
PRE6YOL038W HMS1Q12398 434 aa9.35□□□□□ -0.91
PRE6YOL038W YPR015CQ12531 247 aa9.35□□□□□ -0.91
PRE6YOL038W YOL162WP0CF19 215 aa9.34□□□□□ -0.91
PRE6YOL038W SNC1P31109 117 aa9.34□□□□□ -0.91
PRE6YOL038W MCM10P32354 571 aa9.34□□□□□ -0.91
PRE6YOL038W SLC1P33333 303 aa9.34□□□□□ -0.91
PRE6YOL038W MRPS5P33759 307 aa9.34□□□□□ -0.91
PRE6YOL038W MAE1P36013 669 aaKnown RBP9.34□□□□□ -0.91
PRE6YOL038W RSM22P36056 628 aa9.34□□□□□ -0.91
PRE6YOL038W CHK1P38147 527 aa9.34□□□□□ -0.91
PRE6YOL038W MAL32P38158 584 aa9.34□□□□□ -0.91
PRE6YOL038W ERP6P53198 216 aa9.34□□□□□ -0.91
PRE6YOL038W AGE1Q04412 482 aa9.34□□□□□ -0.91
PRE6YOL038W UTP21Q06078 939 aaPredicted RBP9.34□□□□□ -0.91
PRE6YOL038W DBP9Q06218 594 aaKnown RBP9.34□□□□□ -0.91
PRE6YOL038W NIP7Q08962 181 aaKnown RBP9.34□□□□□ -0.91
PRE6YOL038W YHR214C-EQ8TGK0 99 aa9.34□□□□□ -0.91
PRE6YOL038W PEP4P07267 405 aaKnown RBP9.33□□□□□ -0.92
PRE6YOL038W RPC40P07703 335 aaKnown RBP9.33□□□□□ -0.92
PRE6YOL038W ITR1P30605 584 aa9.33□□□□□ -0.92
PRE6YOL038W PRE2P30656 287 aaKnown RBP9.33□□□□□ -0.92
PRE6YOL038W THI4P32318 326 aa9.33□□□□□ -0.92
PRE6YOL038W PPG1P32838 368 aa9.33□□□□□ -0.92
PRE6YOL038W JEN1P36035 616 aa9.33□□□□□ -0.92
PRE6YOL038W RBG1P39729 369 aa9.33□□□□□ -0.92
PRE6YOL038W VHR1P40522 640 aa9.33□□□□□ -0.92
PRE6YOL038W YGR016WP53209 190 aa9.33□□□□□ -0.92
PRE6YOL038W YNL095CP53932 642 aa9.33□□□□□ -0.92
PRE6YOL038W YDR102CQ03864 110 aa9.33□□□□□ -0.92
PRE6YOL038W YPL191CQ08930 360 aa9.33□□□□□ -0.92
PRE6YOL038W PPA2P28239 310 aa9.32□□□□□ -0.92
PRE6YOL038W HCS1P34243 683 aa9.32□□□□□ -0.92
PRE6YOL038W GPX1P36014 167 aa9.32□□□□□ -0.92
PRE6YOL038W MOB2P43563 287 aa9.32□□□□□ -0.92
PRE6YOL038W BAT2P47176 376 aaKnown RBP9.32□□□□□ -0.92
PRE6YOL038W ELA1P53861 379 aaPredicted RBP9.32□□□□□ -0.92
PRE6YOL038W MRPL19P53875 158 aa9.32□□□□□ -0.92
PRE6YOL038W TIM10P87108 93 aa9.32□□□□□ -0.92
PRE6YOL038W YAP6Q03935 383 aa9.32□□□□□ -0.92
PRE6YOL038W WSC3Q12215 556 aa9.32□□□□□ -0.92
PRE6YOL038W NUP1P20676 1076 aa9.31□□□□□ -0.92
PRE6YOL038W HIS7P33734 552 aaKnown RBP9.31□□□□□ -0.92
PRE6YOL038W MSN4P33749 630 aa9.31□□□□□ -0.92
PRE6YOL038W YKL071WP36086 256 aa9.31□□□□□ -0.92
PRE6YOL038W YBR241CP38142 488 aa9.31□□□□□ -0.92
PRE6YOL038W ISC1P40015 477 aaKnown RBP9.31□□□□□ -0.92
PRE6YOL038W YTA6P40328 754 aa9.31□□□□□ -0.92
PRE6YOL038W YIL166CP40445 542 aa9.31□□□□□ -0.92
PRE6YOL038W HMS2P47175 358 aa9.31□□□□□ -0.92
PRE6YOL038W RRN5Q02983 363 aa9.31□□□□□ -0.92
PRE6YOL038W HMO1Q03973 246 aaKnown RBP9.31□□□□□ -0.92
PRE6YOL038W SPC3Q12133 184 aa9.31□□□□□ -0.92
PRE6YOL038W NFI1Q12216 726 aa9.31□□□□□ -0.92
PRE6YOL038W SEC12P11655 471 aa9.3□□□□□ -0.92
PRE6YOL038W GIT1P25346 518 aa9.3□□□□□ -0.92
PRE6YOL038W PAD1P33751 242 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
PRE6YOL038W YBR220CP38318 560 aa9.3□□□□□ -0.92
PRE6YOL038W YER084WP40057 128 aa9.3□□□□□ -0.92
PRE6YOL038W QRI7P43122 407 aa9.3□□□□□ -0.92
PRE6YOL038W QRI1P43123 477 aaKnown RBP9.3□□□□□ -0.92
PRE6YOL038W ACS2P52910 683 aaKnown RBP9.3□□□□□ -0.92
PRE6YOL038W DML1Q03652 475 aa9.3□□□□□ -0.92
PRE6YOL038W YLR126CQ12288 251 aa9.3□□□□□ -0.92
PRE6YOL038W CDC3P32457 520 aaKnown RBP9.29□□□□□ -0.92
PRE6YOL038W RTC2P38279 296 aa9.29□□□□□ -0.92
PRE6YOL038W PRS3P38689 320 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms