RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PTGISQ16647 500 aa19.28■□□□□ 0.68
PHGDH-230ENST00000641927 KLHL10Q6JEL2 608 aa19.28■□□□□ 0.68
PHGDH-230ENST00000641927 DEPTORQ8TB45 409 aa19.28■□□□□ 0.68
PHGDH-230ENST00000641927 ZNF668Q96K58 619 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-230ENST00000641927 NLRP4Q96MN2 994 aa19.28■□□□□ 0.68
PHGDH-230ENST00000641927 DACH1Q9UI36 760 aa19.28■□□□□ 0.68
PHGDH-230ENST00000641927 EVPLQ92817 2033 aa19.28■□□□□ 0.68
PHGDH-230ENST00000641927 SMIM35A0A1B0GVV1 85 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 MYBP10242 640 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 PRCPP42785 496 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 NAMPTP43490 491 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 CASP5P51878 434 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 PTPN11Q06124 597 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-230ENST00000641927 STIM1Q13586 685 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 STXBP4Q6ZWJ1 553 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 KIAA0319LQ8IZA0 1049 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 LINC01465Q8N7H1 131 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 RNF149Q8NC42 400 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 DNAJB3Q8WWF6 145 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 SCLT1Q96NL6 688 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 TRMT13Q9NUP7 481 aaKnown RBP19.27■□□□□ 0.68
PHGDH-230ENST00000641927 KCNG1Q9UIX4 513 aa19.27■□□□□ 0.68
PHGDH-230ENST00000641927 ARVCFO00192 962 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 TMEM62Q0P6H9 643 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 CAPSQ13938 189 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 TFDP1Q14186 410 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 ZC2HC1CQ53FD0 456 aaPredicted RBP19.27■□□□□ 0.67
PHGDH-230ENST00000641927 C11orf57Q6ZUT1 292 aaPredicted RBP19.27■□□□□ 0.67
PHGDH-230ENST00000641927 ZNF720Q7Z2F6 126 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 HAUS6Q7Z4H7 955 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 MYOCDQ8IZQ8 938 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 SPIRE2Q8WWL2 714 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 FIZ1Q96SL8 496 aa19.27■□□□□ 0.67
PHGDH-230ENST00000641927 NAT10Q9H0A0 1025 aaKnown RBP19.27■□□□□ 0.67
PHGDH-230ENST00000641927 ASAP2O43150 1006 aa19.26■□□□□ 0.67
PHGDH-230ENST00000641927 CD44P16070 742 aaKnown RBP19.26■□□□□ 0.67
PHGDH-230ENST00000641927 ATN1P54259 1190 aaPredicted RBP19.26■□□□□ 0.67
PHGDH-230ENST00000641927 NCKAP1LP55160 1127 aa19.26■□□□□ 0.67
PHGDH-230ENST00000641927 TAF2Q6P1X5 1199 aa19.26■□□□□ 0.67
PHGDH-230ENST00000641927 NELFCDQ8IXH7 590 aa19.26■□□□□ 0.67
PHGDH-230ENST00000641927 SLC17A8Q8NDX2 589 aa19.26■□□□□ 0.67
PHGDH-230ENST00000641927 DIS3LQ8TF46 1054 aaKnown RBP19.26■□□□□ 0.67
PHGDH-230ENST00000641927 NLRP7Q8WX94 980 aa19.26■□□□□ 0.67
PHGDH-230ENST00000641927 GINS2Q9Y248 185 aa19.26■□□□□ 0.67
PHGDH-230ENST00000641927 PCDHB13Q9Y5F0 798 aa19.26■□□□□ 0.67
PHGDH-230ENST00000641927 TRIP12Q14669 1992 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-230ENST00000641927 PPP1R3GB7ZBB8 358 aa19.25■□□□□ 0.67
PHGDH-230ENST00000641927 PRPF6O94906 941 aaKnown RBP19.25■□□□□ 0.67
PHGDH-230ENST00000641927 KIF20AO95235 890 aa19.25■□□□□ 0.67
PHGDH-230ENST00000641927 MAPTP10636 758 aaKnown RBP19.25■□□□□ 0.67
PHGDH-230ENST00000641927 MNX1P50219 401 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-230ENST00000641927 ANKLE1Q8NAG6 615 aa19.25■□□□□ 0.67
PHGDH-230ENST00000641927 SCFD1Q8WVM8 642 aa19.25■□□□□ 0.67
PHGDH-230ENST00000641927 NTPCRQ9BSD7 190 aaKnown RBP19.25■□□□□ 0.67
PHGDH-230ENST00000641927 CTNND2Q9UQB3 1225 aa19.25■□□□□ 0.67
PHGDH-230ENST00000641927 DENND3A2RUS2 1198 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 H0YCG3 227 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 PSMA7O14818 248 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 NLRP11P59045 1033 aaKnown RBP19.24■□□□□ 0.67
PHGDH-230ENST00000641927 RSPH3Q86UC2 560 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 SERINC5Q86VE9 423 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 ADSSL1Q8N142 457 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 SLC43A3Q8NBI5 491 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 TMEM161BQ8NDZ6 487 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 TRPV6Q9H1D0 765 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 ADGRA3Q8IWK6 1321 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 A0A087WZ62 844 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 EIF3DO15371 548 aaKnown RBP eCLIP19.24■□□□□ 0.67
PHGDH-230ENST00000641927 B4GALT4O60513 344 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 PPP1R2P41236 205 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 ALCAMQ13740 583 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 KIZQ2M2Z5 673 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 EPM2AIP1Q7L775 607 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-230ENST00000641927 ZBTB8OSQ8IWT0 167 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 GUF1Q8N442 669 aaKnown RBP19.24■□□□□ 0.67
PHGDH-230ENST00000641927 PAWRQ96IZ0 340 aaKnown RBP19.24■□□□□ 0.67
PHGDH-230ENST00000641927 FDXACB1Q9BRP7 624 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-230ENST00000641927 SEZ6LQ9BYH1 1024 aa19.24■□□□□ 0.67
PHGDH-230ENST00000641927 PHKA2P46019 1235 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 ZNF165P49910 485 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 GPC3P51654 580 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 STX17P56962 302 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 CDC42EP1Q00587 391 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 KCNA1Q09470 495 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 PAK1Q13153 545 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 SYCP3Q8IZU3 236 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 NME8Q8N427 588 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 NELFBQ8WX92 580 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 C11orf49Q9H6J7 331 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 ARHGAP28Q9P2N2 729 aa19.23■□□□□ 0.67
PHGDH-230ENST00000641927 K7ERI5 159 aa19.22■□□□□ 0.67
PHGDH-230ENST00000641927 M0QZ92 97 aa19.22■□□□□ 0.67
PHGDH-230ENST00000641927 PQBP1O60828 265 aaKnown RBP19.22■□□□□ 0.67
PHGDH-230ENST00000641927 THPOP40225 353 aa19.22■□□□□ 0.67
PHGDH-230ENST00000641927 CDK7P50613 346 aa19.22■□□□□ 0.67
PHGDH-230ENST00000641927 GTF2BQ00403 316 aa19.22■□□□□ 0.67
PHGDH-230ENST00000641927 STRN3Q13033 797 aa19.22■□□□□ 0.67
PHGDH-230ENST00000641927 COBLL1Q53SF7 1204 aa19.22■□□□□ 0.67
PHGDH-230ENST00000641927 SLC39A5Q6ZMH5 540 aa19.22■□□□□ 0.67
PHGDH-230ENST00000641927 RNF214Q8ND24 703 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms