RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	GAP43	P17677	238 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	SLFN11	Q7Z7L1	901 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	ARHGEF19	Q8IW93	802 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	ACTRT1	Q8TDG2	376 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	C7orf43	Q8WVR3	580 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	ARHGEF10L	Q9HCE6	1279 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	GPRC5C	Q9NQ84	441 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	SPDYE2B	A6NHP3	402 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	BACH1	O14867	736 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	SLC26A4	O43511	780 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	VIL1	P09327	827 aa	Known RBP	18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	SPDYE6	P0CI01	402 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	INPP5B	P32019	993 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	MARCKSL1	P49006	195 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	SPP2	Q13103	211 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	CPXCR1	Q8N123	301 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	ISCU	Q9H1K1	167 aa		18.28	■□□□□ 0.52
PHGDH-223	ENST00000641597	DCDC2C	A8MYV0	355 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597		K7ENM7	598 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	ATMIN	O43313	823 aa	Predicted RBP	18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	FER	P16591	822 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	GCLM	P48507	274 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	MYL7	Q01449	175 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	PPP3CA	Q08209	521 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	C10orf76	Q5T2E6	689 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	HS2ST1	Q7LGA3	356 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	ALG3	Q92685	438 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	GLG1	Q92896	1179 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	SYT11	Q9BT88	431 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	STK33	Q9BYT3	514 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	FAM107B	Q9H098	131 aa		18.27	■□□□□ 0.52
PHGDH-223	ENST00000641597	GOLGA8IP	A6NC78	632 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	GOLGA8J	A6NMD2	632 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	TMEM110-MUSTN1	A8MSY1	372 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	EIF3D	O15371	548 aa	Known RBP eCLIP	18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	ZNF131	P52739	623 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	VPS36	Q86VN1	386 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	PLEKHO2	Q8TD55	490 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	HES6	Q96HZ4	224 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	DMAC2	Q9NW81	257 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	ZNF70	Q9UC06	446 aa	Predicted RBP	18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	FRMD4B	Q9Y2L6	1034 aa		18.27	■□□□□ 0.51
PHGDH-223	ENST00000641597	CNTNAP1	P78357	1384 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	ARHGEF35	A5YM69	484 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	CALCA	P01258	141 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	USP8	P40818	1118 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	CORO7	P57737	925 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	UBAP2	Q5T6F2	1119 aa	Known RBP	18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	CHADL	Q6NUI6	762 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	PADI6	Q6TGC4	694 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	LMO3	Q8TAP4	145 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	PBK	Q96KB5	322 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	NACC1	Q96RE7	527 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	RANBP17	Q9H2T7	1088 aa	Known RBP	18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	APEX2	Q9UBZ4	518 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	FBXL5	Q9UKA1	691 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	EMSY	Q7Z589	1322 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	BFSP1	Q12934	665 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	SLC15A2	Q16348	729 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	PACS2	Q86VP3	889 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	KIFC3	Q9BVG8	833 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	UBE2T	Q9NPD8	197 aa	Predicted RBP	18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	KCNH7	Q9NS40	1196 aa		18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.26	■□□□□ 0.51
PHGDH-223	ENST00000641597	GTPBP10	A4D1E9	387 aa	Known RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	NPM3	O75607	178 aa	Known RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	NR1D1	P20393	614 aa		18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	HSPA9	P38646	679 aa	Known RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	ITGB3BP	Q13352	177 aa	Predicted RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	UBLCP1	Q8WVY7	318 aa	Predicted RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	GOPC	Q9HD26	462 aa		18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	DDX3Y	O15523	660 aa	Known RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	PPP1R12B	O60237	982 aa	Predicted RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	LIG3	P49916	1009 aa		18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	FKBP1A	P62942	108 aa	Known RBP	18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	UGCG	Q16739	394 aa		18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	MCTP2	Q6DN12	878 aa		18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	MREG	Q8N565	214 aa		18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	WHAMM	Q8TF30	809 aa		18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597	KRT35	Q92764	455 aa		18.25	■□□□□ 0.51
PHGDH-223	ENST00000641597		H0YGN5	161 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	SOX10	P56693	466 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	SKOR1	P84550	965 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	ZNF844	Q08AG5	666 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	B3GNT9	Q6UX72	402 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	BTBD6	Q96KE9	485 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	ATP6V1G3	Q96LB4	118 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	TEKT3	Q9BXF9	490 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	VCPKMT	Q9H867	229 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	AMFR	Q9UKV5	643 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	NFS1	Q9Y697	457 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	FAM169A	Q9Y6X4	670 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	NDUFAB1	O14561	156 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	PPP1R37	O75864	691 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	TNFAIP3	P21580	790 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	LSP1	P33241	339 aa		18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	CTNNA1	P35221	906 aa	Known RBP	18.24	■□□□□ 0.51
PHGDH-223	ENST00000641597	PPAT	Q06203	517 aa		18.24	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms