RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 TSG101Q99816 390 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 TMEM39AQ9NV64 488 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 ANO10Q9NW15 660 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 TBC1D7Q9P0N9 293 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 PCDHA5Q9Y5H7 936 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 TRPV2Q9Y5S1 764 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 MYH9P35579 1960 aaKnown RBP14.27□□□□□ -0.12
PHGDH-220ENST00000641570 UBE4BO95155 1302 aa14.27□□□□□ -0.12
PHGDH-220ENST00000641570 IGKV6-21A0A0C4DH24 114 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 INO80B-WBP1J3KQ70 363 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 B4GALT4O60513 344 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 MAPTP10636 758 aaKnown RBP14.27□□□□□ -0.13
PHGDH-220ENST00000641570 NLRP11P59045 1033 aaKnown RBP14.27□□□□□ -0.13
PHGDH-220ENST00000641570 MRPS6P82932 125 aaKnown RBP14.27□□□□□ -0.13
PHGDH-220ENST00000641570 ZNF200P98182 395 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-220ENST00000641570 TMEM62Q0P6H9 643 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 HSP90AA2PQ14568 343 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-220ENST00000641570 MAPK6Q16659 721 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-220ENST00000641570 RUFY4Q6ZNE9 571 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 SERINC5Q86VE9 423 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 LRRC15Q8TF66 581 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 SPIRE2Q8WWL2 714 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 ERCC4Q92889 916 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-220ENST00000641570 TOX2Q96NM4 488 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 XPNPEP1Q9NQW7 623 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 OLFML3Q9NRN5 406 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 TMEM63CQ9P1W3 806 aa14.27□□□□□ -0.13
PHGDH-220ENST00000641570 SYCE3A1L190 88 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 K7ERI5 159 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 PSMA7O14818 248 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 SLC16A4O15374 487 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 RHOBTB3O94955 611 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 CLTBP09497 229 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 GLRA2P23416 452 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 ARL2P36404 184 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 NPTX2P47972 431 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 KIZQ2M2Z5 673 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 MARCH8Q5T0T0 291 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 ZNF658Q5TYW1 1059 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-220ENST00000641570 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 ISM2Q6H9L7 571 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 HS2ST1Q7LGA3 356 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 KIAA0319LQ8IZA0 1049 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 SLC43A3Q8NBI5 491 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 ASAP3Q8TDY4 903 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 HVCN1Q96D96 273 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 DNAJC19Q96DA6 116 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 ZBTB10Q96DT7 871 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 ACCSQ96QU6 501 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 HIPK3Q9H422 1215 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 TMEM206Q9H813 350 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 POLD4Q9HCU8 107 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 SLC39A2Q9NP94 309 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 MAN1B1Q9UKM7 699 aa14.26□□□□□ -0.13
PHGDH-220ENST00000641570 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 GRIN2DO15399 1336 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 DENND3A2RUS2 1198 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 PARNO95453 639 aaKnown RBP14.25□□□□□ -0.13
PHGDH-220ENST00000641570 COL6A1P12109 1028 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 HOXC8P31273 242 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 GPC3P51654 580 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 ZNF131P52739 623 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 CRYBB1P53674 252 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-220ENST00000641570 TPM4P67936 248 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 TLE2Q04725 743 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 CAPSQ13938 189 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 PCBP1Q15365 356 aaKnown RBP eCLIP14.25□□□□□ -0.132e-6■■■□□ 14.6
PHGDH-220ENST00000641570 ZSCAN23Q3MJ62 389 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 CATSPER4Q7RTX7 472 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 ANKRD33Q7Z3H0 272 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 SRGAP1Q7Z6B7 1085 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 FAM126BQ8IXS8 530 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 GOLGA5Q8TBA6 731 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 OSMRQ99650 979 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 PRMT7Q9NVM4 692 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-220ENST00000641570 CDY2AQ9Y6F7 541 aa14.25□□□□□ -0.13
PHGDH-220ENST00000641570 A0A087WZ62 844 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 BICDL2A1A5D9 508 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 FRMD3A2A2Y4 597 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 TULP1O00294 542 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-220ENST00000641570 HNRNPDLO14979 420 aaKnown RBP14.24□□□□□ -0.13
PHGDH-220ENST00000641570 EIF3DO15371 548 aaKnown RBP eCLIP14.24□□□□□ -0.13
PHGDH-220ENST00000641570 CALUO43852 315 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-220ENST00000641570 RPS6KA5O75582 802 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 PRKCBP05771 671 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 RAG1P15918 1043 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 SELPP16109 830 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 LIG4P49917 911 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 CDK7P50613 346 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 NLRP12P59046 1061 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 MDM2Q00987 491 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-220ENST00000641570 PAK2Q13177 524 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 DRP2Q13474 957 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 KLHL10Q6JEL2 608 aa14.24□□□□□ -0.13
PHGDH-220ENST00000641570 LRRC8DQ7L1W4 858 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms