RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 TRIM31Q9BZY9 425 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SENP2Q9HC62 589 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SLC5A4Q9NY91 659 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 BTBD7Q9P203 1132 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 CAPN11Q9UMQ6 739 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 EXOC7Q9UPT5 735 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 PCDHA1Q9Y5I3 950 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 PIK3C2AO00443 1686 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 PNMA6FA0A0J9YX94 578 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 TTC26A0AVF1 554 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 AGPSO00116 658 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 GFPT2O94808 682 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 CAMTA2O94983 1202 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SERPING1P05155 500 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 CASP1P29466 404 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 EIF4A3P38919 411 aaKnown RBP6.09□□□□□ -1.43
SCARB2-218ENST00000639715 TMEM62Q0P6H9 643 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 PPP1R18Q6NYC8 613 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 IQCF2Q8IXL9 164 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 ANKRD42Q8N9B4 389 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 CHURC1Q8WUH1 139 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 NMD3Q96D46 503 aaKnown RBP6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SH3GL1Q99961 368 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 AMNQ9BXJ7 453 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 PALMDQ9NP74 551 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 TXLNGQ9NUQ3 528 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SUN2Q9UH99 717 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 KIAA1024Q9UPX6 916 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 PCDHA13Q9Y5I0 950 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 MST1RQ04912 1400 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 EXOC3O60645 756 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 DNAJC6O75061 913 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 CYP2D6P10635 497 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 GAP43P17677 238 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SP100P23497 879 aaPredicted RBP6.09□□□□□ -1.43
SCARB2-218ENST00000639715 KIF11P52732 1056 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 PDE1BQ01064 536 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 RASSF7Q02833 373 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 TROAPQ12815 778 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 EXOC3L4Q17RC7 722 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 C12orf60Q5U649 245 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SLFN13Q68D06 897 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 USP17L2Q6R6M4 530 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 FBXO11Q86XK2 927 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 ADSSL1Q8N142 457 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 GUF1Q8N442 669 aaKnown RBP6.09□□□□□ -1.43
SCARB2-218ENST00000639715 NEDD1Q8NHV4 660 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 CELF1Q92879 486 aaKnown RBP6.09□□□□□ -1.43
SCARB2-218ENST00000639715 CEP63Q96MT8 703 aa6.09□□□□□ -1.43
SCARB2-218ENST00000639715 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCARB2-218ENST00000639715 IQCA1LA6NCM1 817 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 ABLIM1O14639 778 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 S100BP04271 92 aaPredicted RBP6.09□□□□□ -1.44
SCARB2-218ENST00000639715 RXRBP28702 533 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 ATP5DP30049 168 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 PHBP35232 272 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 KCNJ2P63252 427 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 KCTD21Q4G0X4 260 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 PRR16Q569H4 304 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 USP49Q70CQ1 688 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 STAG2Q8N3U4 1231 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 SPATA4Q8NEY3 305 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 DNAI2Q9GZS0 605 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 KANSL2Q9H9L4 492 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 PLCB1Q9NQ66 1216 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 ABCF3Q9NUQ8 709 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 PCMTD2Q9NV79 361 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 ZNF219Q9P2Y4 722 aaPredicted RBP6.09□□□□□ -1.44
SCARB2-218ENST00000639715 PARP2Q9UGN5 583 aa6.09□□□□□ -1.44
SCARB2-218ENST00000639715 FMN2Q9NZ56 1722 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ANKRD62A6NC57 917 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 KCNK3O14649 394 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ATP2A1O14983 1001 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 UBOX5O94941 541 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 RHOBTB3O94955 611 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 LMNAP02545 664 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 CCDC166P0CW27 439 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 SMARCA1P28370 1054 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 LBRQ14739 615 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 CERKLQ49MI3 558 aaPredicted RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 NT5DC1Q5TFE4 455 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 WDR78Q5VTH9 848 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 IRGCQ6NXR0 463 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ZNF449Q6P9G9 518 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 FBXO33Q7Z6M2 555 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 RUBCNQ92622 972 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 CNKSR1Q969H4 720 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 EEF2KMTQ96G04 330 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 PBKQ96KB5 322 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 XPO6Q96QU8 1125 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 MXD3Q9BW11 206 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 FAM192AQ9GZU8 254 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 LZTS1Q9Y250 596 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 CARD8Q9Y2G2 431 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ATP6V0A2Q9Y487 856 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 BUB1O43683 1085 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 NTSR2O95665 410 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ETS2P15036 469 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 NR2F2P24468 414 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms