RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 AKAP3O75969 853 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 GAP43P17677 238 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 NMT1P30419 496 aaKnown RBP15.19■□□□□ 0.02
ATRIP-208ENST00000639561 KRT83P78385 493 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 NIPA1Q7RTP0 329 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 TRPV1Q8NER1 839 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 NEK11Q8NG66 645 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 UBXN4Q92575 508 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 CCDC94Q9BW85 323 aaPredicted RBP15.19■□□□□ 0.02
ATRIP-208ENST00000639561 AGO4Q9HCK5 861 aaKnown RBP15.19■□□□□ 0.02
ATRIP-208ENST00000639561 TYW1Q9NV66 732 aaKnown RBP15.19■□□□□ 0.02
ATRIP-208ENST00000639561 RIPK3Q9Y572 518 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 SEPT4O43236 478 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 FAM13AO94988 1023 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 COL6A1P12109 1028 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 ZNF131P52739 623 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 ZC2HC1CQ53FD0 456 aaPredicted RBP15.19■□□□□ 0.02
ATRIP-208ENST00000639561 CCDC122Q5T0U0 273 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 ZNF662Q6ZS27 426 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
ATRIP-208ENST00000639561 MSL3Q8N5Y2 521 aaKnown RBP15.19■□□□□ 0.02
ATRIP-208ENST00000639561 MYCT1Q8N699 235 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 CCDC42Q96M95 316 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 TRERF1Q96PN7 1200 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 PARVGQ9HBI0 331 aa15.19■□□□□ 0.02
ATRIP-208ENST00000639561 MYH11P35749 1972 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 NR3C1P04150 777 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 H2AFXP16104 143 aaPredicted RBP15.18■□□□□ 0.02
ATRIP-208ENST00000639561 KCNH2Q12809 1159 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 MTMR1Q13613 665 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 PGM5Q15124 567 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 ZNF792Q3KQV3 632 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 PDXDC1Q6P996 788 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 ARRDC4Q8NCT1 418 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 CHST13Q8NET6 341 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 NAPGQ99747 312 aaPredicted RBP15.18■□□□□ 0.02
ATRIP-208ENST00000639561 LSM14BQ9BX40 385 aaKnown RBP15.18■□□□□ 0.02
ATRIP-208ENST00000639561 JADE2Q9NQC1 790 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 CDC23Q9UJX2 597 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 DUSP10Q9Y6W6 482 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 LOXHD1Q8IVV2 1947 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 PFASO15067 1338 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 DNM1LO00429 736 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 CALUO43852 315 aaPredicted RBP15.18■□□□□ 0.02
ATRIP-208ENST00000639561 CASP4P49662 377 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 RSRC2Q7L4I2 434 aaKnown RBP15.18■□□□□ 0.02
ATRIP-208ENST00000639561 FRMD5Q7Z6J6 570 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 KIAA1328Q86T90 577 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 C7orf61Q8IZ16 206 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 JAKMIP2Q96AA8 810 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 EDEM3Q9BZQ6 932 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 EPC1Q9H2F5 836 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 NLRC4Q9NPP4 1024 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 MAP3K20Q9NYL2 800 aaKnown RBP15.18■□□□□ 0.02
ATRIP-208ENST00000639561 CEP72Q9P209 647 aa15.18■□□□□ 0.02
ATRIP-208ENST00000639561 CEP290O15078 2479 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 CLIC2O15247 247 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
ATRIP-208ENST00000639561 PGK2P07205 417 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 EIF4A3P38919 411 aaKnown RBP15.17■□□□□ 0.02
ATRIP-208ENST00000639561 KIF11P52732 1056 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 AMPD2Q01433 879 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 HGSNATQ68CP4 663 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 RNF207Q6ZRF8 634 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 MIER3Q7Z3K6 550 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 CACNA2D4Q7Z3S7 1137 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 KSR1Q8IVT5 923 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 DAW1Q8N136 415 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 RMDN3Q96TC7 470 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 TINF2Q9BSI4 451 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 ARMCX3Q9UH62 379 aaPredicted RBP15.17■□□□□ 0.02
ATRIP-208ENST00000639561 IPO7O95373 1038 aaKnown RBP15.17■□□□□ 0.02
ATRIP-208ENST00000639561 MAPK7Q13164 816 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 NSMFQ6X4W1 530 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 NEK9Q8TD19 979 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 PDCD2LQ9BRP1 358 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 PXMP2Q9NR77 195 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 KCND2Q9NZV8 630 aa15.17■□□□□ 0.02
ATRIP-208ENST00000639561 GUCY2CP25092 1073 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 VAV2P52735 878 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 POLR2FP61218 127 aaKnown RBP15.16■□□□□ 0.02
ATRIP-208ENST00000639561 ASTE1Q2TB18 679 aaPredicted RBP15.16■□□□□ 0.02
ATRIP-208ENST00000639561 DPY19L2P1Q6NXN4 242 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 ZNF720Q7Z2F6 126 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 RNF146Q9NTX7 359 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 ODF2LQ9ULJ1 636 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 SYNGAP1Q96PV0 1343 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 ARHGEF35A5YM69 484 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 KBTBD13C9JR72 458 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 ENC1O14682 589 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 KRT86O43790 486 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 ATP9AO75110 1047 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 LCA5LO95447 670 aa15.16■□□□□ 0.02
ATRIP-208ENST00000639561 P4HBP07237 508 aaKnown RBP15.16■□□□□ 0.02
ATRIP-208ENST00000639561 MYCLP12524 364 aaPredicted RBP15.16■□□□□ 0.02
ATRIP-208ENST00000639561 ZNF467Q7Z7K2 595 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms