RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 FDXACB1Q9BRP7 624 aaPredicted RBP18.94■□□□□ 0.62
SMN2-216ENST00000638794 PHF20Q9BVI0 1012 aa18.94■□□□□ 0.62
SMN2-216ENST00000638794 ENTPD7Q9NQZ7 604 aa18.94■□□□□ 0.62
SMN2-216ENST00000638794 DACT1Q9NYF0 836 aa18.94■□□□□ 0.62
SMN2-216ENST00000638794 PUF60Q9UHX1 559 aaKnown RBP18.94■□□□□ 0.62
SMN2-216ENST00000638794 CCDC194A0A1B0GVG4 234 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 DDX11L8A8MPP1 907 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 HIDE1A8MVS5 230 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 EML1O00423 815 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 DTNBO60941 627 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 MAFO75444 373 aaPredicted RBP18.93■□□□□ 0.62
SMN2-216ENST00000638794 CDKL5O76039 1030 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 DNM2P50570 870 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 PSMC5P62195 406 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 CDC42EP1Q00587 391 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 PLA2G4FQ68DD2 849 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 RHPN2Q8IUC4 686 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 KCNMB3Q9NPA1 279 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 SPG21Q9NZD8 308 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 SUCLA2Q9P2R7 463 aaPredicted RBP18.93■□□□□ 0.62
SMN2-216ENST00000638794 VAV3Q9UKW4 847 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 STK36Q9NRP7 1315 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 ZNF318Q5VUA4 2279 aa18.93■□□□□ 0.62
SMN2-216ENST00000638794 LOC730098B7Z3J9 87 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 SFPQP23246 707 aaKnown RBP eCLIP18.92■□□□□ 0.62
SMN2-216ENST00000638794 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
SMN2-216ENST00000638794 PPP2R5CQ13362 524 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 KCNC3Q14003 757 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 ZNF410Q86VK4 478 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 KSR1Q8IVT5 923 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 SUSD6Q92537 303 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 SLKQ9H2G2 1235 aaPredicted RBP18.92■□□□□ 0.62
SMN2-216ENST00000638794 NGRNQ9NPE2 291 aaKnown RBP18.92■□□□□ 0.62
SMN2-216ENST00000638794 CHST12Q9NRB3 414 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 GJB4Q9NTQ9 266 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 TPCN1Q9ULQ1 816 aa18.92■□□□□ 0.62
SMN2-216ENST00000638794 PFKFB2O60825 505 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 PHKA2P46019 1235 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 QARSP47897 775 aaKnown RBP18.91■□□□□ 0.62
SMN2-216ENST00000638794 KRT17Q04695 432 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 TWF2Q6IBS0 349 aaKnown RBP18.91■□□□□ 0.62
SMN2-216ENST00000638794 PPP4R3AQ6IN85 833 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 LLGL2Q6P1M3 1020 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 TMEM184AQ6ZMB5 413 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 HFE2Q6ZVN8 426 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 NEK8Q86SG6 692 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 SLC39A11Q8N1S5 342 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 OXER1Q8TDS5 423 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 FAM20AQ96MK3 541 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 NLRP4Q96MN2 994 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 PHF7Q9BWX1 381 aaPredicted RBP18.91■□□□□ 0.62
SMN2-216ENST00000638794 MRPL9Q9BYD2 267 aaKnown RBP18.91■□□□□ 0.62
SMN2-216ENST00000638794 CYP26B1Q9NR63 512 aa18.91■□□□□ 0.62
SMN2-216ENST00000638794 PIN4Q9Y237 131 aaKnown RBP18.91■□□□□ 0.62
SMN2-216ENST00000638794 ARID2Q68CP9 1835 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 CCNT1O60563 726 aaKnown RBP18.9■□□□□ 0.62
SMN2-216ENST00000638794 SRGAP2BP0DMP2 458 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 XBP1P17861 261 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 TECP42680 631 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 NPEPPSP55786 919 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 CBX2Q14781 532 aaPredicted RBP18.9■□□□□ 0.62
SMN2-216ENST00000638794 ANKRD54Q6NXT1 300 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 PIK3AP1Q6ZUJ8 805 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 TMC7Q7Z402 723 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 LPPQ93052 612 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 TRAIPQ9BWF2 469 aa18.9■□□□□ 0.62
SMN2-216ENST00000638794 INO80BQ9C086 356 aaPredicted RBP18.9■□□□□ 0.62
SMN2-216ENST00000638794 WRAP73Q9P2S5 460 aaPredicted RBP18.9■□□□□ 0.62
SMN2-216ENST00000638794 NT5C1B-RDH14C9J2C7 533 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 CTDNEP1O95476 244 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 GCFC2P16383 781 aaKnown RBP18.89■□□□□ 0.61
SMN2-216ENST00000638794 BCAR1P56945 870 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 SMC1AQ14683 1233 aaKnown RBP18.89■□□□□ 0.61
SMN2-216ENST00000638794 LONRF3Q496Y0 759 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 EARS2Q5JPH6 523 aaKnown RBP18.89■□□□□ 0.61
SMN2-216ENST00000638794 SYCE2Q6PIF2 218 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 CATSPER4Q7RTX7 472 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 ZNF579Q8NAF0 562 aaKnown RBP18.89■□□□□ 0.61
SMN2-216ENST00000638794 EDAQ92838 391 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 HAS1Q92839 578 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 RPGRIP1Q96KN7 1286 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 JPH2Q9BR39 696 aaPredicted RBP18.89■□□□□ 0.61
SMN2-216ENST00000638794 APOL5Q9BWW9 433 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 S1PR5Q9H228 398 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 IFT122Q9HBG6 1241 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 FAM105AQ9NUU6 356 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 PIEZO1Q92508 2521 aa18.89■□□□□ 0.61
SMN2-216ENST00000638794 MEIS3P2A8K0S8 358 aa18.88■□□□□ 0.61
SMN2-216ENST00000638794 P4HBP07237 508 aaKnown RBP18.88■□□□□ 0.61
SMN2-216ENST00000638794 ALDH7A1P49419 539 aaKnown RBP18.88■□□□□ 0.61
SMN2-216ENST00000638794 TMEM173Q86WV6 379 aaPredicted RBP18.88■□□□□ 0.61
SMN2-216ENST00000638794 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
SMN2-216ENST00000638794 SLC7A3Q8WY07 619 aa18.88■□□□□ 0.61
SMN2-216ENST00000638794 CEP170P1Q96L14 293 aa18.88■□□□□ 0.61
SMN2-216ENST00000638794 LXNQ9BS40 222 aa18.88■□□□□ 0.61
SMN2-216ENST00000638794 COL4A3BPQ9Y5P4 624 aa18.88■□□□□ 0.61
SMN2-216ENST00000638794 FAM205CA6NFA0 338 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 C2orf71A6NGG8 1288 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 TBX3O15119 743 aa18.87■□□□□ 0.61
SMN2-216ENST00000638794 DKC1O60832 514 aaKnown RBP eCLIP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms