RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 GRID2IPA4D2P6 1211 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 C19orf81C9J6K1 198 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 GTF2BQ00403 316 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 CASP8Q14790 479 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 DRAP1Q14919 205 aaPredicted RBP23.43■■□□□ 1.34
CLN6-224ENST00000638076 TMEM132BQ14DG7 1078 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 R3HDM1Q15032 1099 aaKnown RBP23.43■■□□□ 1.34
CLN6-224ENST00000638076 FAM102BQ5T8I3 360 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 MEI1Q5TIA1 1274 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 CCDC70Q6NSX1 233 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 GPRASP2Q96D09 838 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 KLRG1Q96E93 195 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 SLC16A4O15374 487 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 MATR3P43243 847 aaKnown RBP eCLIP23.42■■□□□ 1.34
CLN6-224ENST00000638076 DNA2P51530 1060 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 DLG4P78352 724 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 SGIP1Q9BQI5 828 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 MOV10L1Q9BXT6 1211 aaKnown RBP23.42■■□□□ 1.34
CLN6-224ENST00000638076 ANKEF1Q9NU02 776 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 GGA3Q9NZ52 723 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 APEX2Q9UBZ4 518 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 NENFQ9UMX5 172 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 PACSIN2Q9UNF0 486 aaPredicted RBP23.42■■□□□ 1.34
CLN6-224ENST00000638076 COL11A1P12107 1806 aaPredicted RBP23.42■■□□□ 1.34
CLN6-224ENST00000638076 RLFQ13129 1914 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 PHIPQ8WWQ0 1821 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 ZNF746Q6NUN9 644 aaPredicted RBP23.42■■□□□ 1.34
CLN6-224ENST00000638076 INTS8Q75QN2 995 aaKnown RBP23.42■■□□□ 1.34
CLN6-224ENST00000638076 NSUN6Q8TEA1 469 aaKnown RBP23.42■■□□□ 1.34
CLN6-224ENST00000638076 MS4A14Q96JA4 679 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 ST6GALNAC4Q9H4F1 302 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 ZCCHC17Q9NP64 241 aaKnown RBP23.42■■□□□ 1.34
CLN6-224ENST00000638076 PCDHA10Q9Y5I2 948 aa23.42■■□□□ 1.34
CLN6-224ENST00000638076 DDX3XO00571 662 aaKnown RBP eCLIP23.41■■□□□ 1.342e-13■■■□□ 16.8
CLN6-224ENST00000638076 MAP9Q49MG5 647 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 ANO5Q75V66 913 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 C12orf56Q8IXR9 622 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 TMEM174Q8WUU8 243 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 INPP4AQ96PE3 977 aaPredicted RBP23.41■■□□□ 1.34
CLN6-224ENST00000638076 LRRC1Q9BTT6 524 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 PDE11AQ9HCR9 933 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 HSPBP1Q9NZL4 362 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 MAFGO15525 162 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 NCKAP1LP55160 1127 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 CATSPERGQ6ZRH7 1159 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 RDM1Q8NG50 284 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 GPR88Q9GZN0 384 aa23.41■■□□□ 1.34
CLN6-224ENST00000638076 H3BQF6 201 aa23.4■■□□□ 1.34
CLN6-224ENST00000638076 NOP2P46087 812 aaKnown RBP23.4■■□□□ 1.34
CLN6-224ENST00000638076 VAMP7P51809 220 aa23.4■■□□□ 1.34
CLN6-224ENST00000638076 CFAP221Q4G0U5 840 aa23.4■■□□□ 1.34
CLN6-224ENST00000638076 MSL3Q8N5Y2 521 aaKnown RBP23.4■■□□□ 1.34
CLN6-224ENST00000638076 XXYLT1Q8NBI6 393 aa23.4■■□□□ 1.34
CLN6-224ENST00000638076 ZSWIM2Q8NEG5 633 aa23.4■■□□□ 1.34
CLN6-224ENST00000638076 GPRC5DQ9NZD1 345 aa23.4■■□□□ 1.34
CLN6-224ENST00000638076 EMSYQ7Z589 1322 aa23.4■■□□□ 1.34
CLN6-224ENST00000638076 RGS20O76081 388 aa23.39■■□□□ 1.34
CLN6-224ENST00000638076 PHLDB3Q6NSJ2 640 aa23.39■■□□□ 1.34
CLN6-224ENST00000638076 LMO3Q8TAP4 145 aa23.39■■□□□ 1.34
CLN6-224ENST00000638076 U2AF1L4Q8WU68 220 aaKnown RBP23.39■■□□□ 1.34
CLN6-224ENST00000638076 SENP7Q9BQF6 1050 aa23.39■■□□□ 1.34
CLN6-224ENST00000638076 TEX13BQ9BXU2 312 aa23.39■■□□□ 1.34
CLN6-224ENST00000638076 TMOD4Q9NZQ9 345 aa23.39■■□□□ 1.34
CLN6-224ENST00000638076 RNF14Q9UBS8 474 aa23.39■■□□□ 1.34
CLN6-224ENST00000638076 LRRIQ3A6PVS8 624 aaPredicted RBP23.39■■□□□ 1.33
CLN6-224ENST00000638076 EIF3JO75822 258 aaKnown RBP23.39■■□□□ 1.33
CLN6-224ENST00000638076 GPS2Q13227 327 aa23.39■■□□□ 1.33
CLN6-224ENST00000638076 CCDC125Q86Z20 511 aa23.39■■□□□ 1.33
CLN6-224ENST00000638076 NLGN2Q8NFZ4 835 aa23.39■■□□□ 1.33
CLN6-224ENST00000638076 LNX1Q8TBB1 728 aaPredicted RBP23.39■■□□□ 1.33
CLN6-224ENST00000638076 HDAC7Q8WUI4 952 aa23.39■■□□□ 1.33
CLN6-224ENST00000638076 ZBTB9Q96C00 473 aa23.39■■□□□ 1.33
CLN6-224ENST00000638076 HINFPQ9BQA5 517 aa23.39■■□□□ 1.33
CLN6-224ENST00000638076 CYP39A1Q9NYL5 469 aa23.39■■□□□ 1.33
CLN6-224ENST00000638076 GABBR1Q9UBS5 961 aa23.39■■□□□ 1.33
CLN6-224ENST00000638076 CCDC169A6NNP5 214 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 H2AFZP0C0S5 128 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 MYBL2P10244 700 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 KCNA2P16389 499 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 IFI16Q16666 785 aaKnown RBP23.38■■□□□ 1.33
CLN6-224ENST00000638076 ARHGAP44Q17R89 818 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 CCNI2Q6ZMN8 369 aaPredicted RBP23.38■■□□□ 1.33
CLN6-224ENST00000638076 H2AFVQ71UI9 128 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 IWS1Q96ST2 819 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 ACAD9Q9H845 621 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 A1CFQ9NQ94 594 aaKnown RBP23.38■■□□□ 1.33
CLN6-224ENST00000638076 RBM12Q9NTZ6 932 aaKnown RBP23.38■■□□□ 1.33
CLN6-224ENST00000638076 ATP8B3O60423 1300 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 ATP2A1O14983 1001 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 PPP3CAQ08209 521 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 PRKG1Q13976 671 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 GSPT2Q8IYD1 628 aaKnown RBP23.38■■□□□ 1.33
CLN6-224ENST00000638076 OLIG1Q8TAK6 271 aa23.38■■□□□ 1.33
CLN6-224ENST00000638076 DMGDHQ9UI17 866 aaKnown RBP23.38■■□□□ 1.33
CLN6-224ENST00000638076 HIRAP54198 1017 aaPredicted RBP23.37■■□□□ 1.33
CLN6-224ENST00000638076 SNRPFP62306 86 aaKnown RBP23.37■■□□□ 1.33
CLN6-224ENST00000638076 GLYCTKQ8IVS8 523 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 SLC17A8Q8NDX2 589 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 TMEM161BQ8NDZ6 487 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 SLC30A5Q8TAD4 765 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms