RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 UBXN11Q5T124 520 aa8.8□□□□□ -1
PNKP-229ENST00000637897 PTCRAQ6ISU1 281 aaPredicted RBP8.8□□□□□ -1
PNKP-229ENST00000637897 COLGALT1Q8NBJ5 622 aa8.8□□□□□ -1
PNKP-229ENST00000637897 SPRYD3Q8NCJ5 442 aa8.8□□□□□ -1
PNKP-229ENST00000637897 BCL7CQ8WUZ0 217 aaPredicted RBP8.8□□□□□ -1
PNKP-229ENST00000637897 TNPO1Q92973 898 aaKnown RBP8.8□□□□□ -1
PNKP-229ENST00000637897 LPPQ93052 612 aa8.8□□□□□ -1
PNKP-229ENST00000637897 DYDC2Q96IM9 177 aa8.8□□□□□ -1
PNKP-229ENST00000637897 FAM20AQ96MK3 541 aa8.8□□□□□ -1
PNKP-229ENST00000637897 HSD17B14Q9BPX1 270 aa8.8□□□□□ -1
PNKP-229ENST00000637897 C11orf84Q9BUA3 381 aaPredicted RBP8.8□□□□□ -1
PNKP-229ENST00000637897 LMAN2LQ9H0V9 348 aa8.8□□□□□ -1
PNKP-229ENST00000637897 CYP26B1Q9NR63 512 aa8.8□□□□□ -1
PNKP-229ENST00000637897 C1orf112Q9NSG2 853 aa8.8□□□□□ -1
PNKP-229ENST00000637897 BMP2KQ9NSY1 1161 aaPredicted RBP8.8□□□□□ -1
PNKP-229ENST00000637897 PCDHB7Q9Y5E2 793 aa8.8□□□□□ -1
PNKP-229ENST00000637897 TRIOO75962 3097 aa8.8□□□□□ -1
PNKP-229ENST00000637897 A0A0U1RQF3 1178 aa8.79□□□□□ -1
PNKP-229ENST00000637897 CCDC194A0A1B0GVG4 234 aa8.79□□□□□ -1
PNKP-229ENST00000637897 DENND3A2RUS2 1198 aa8.79□□□□□ -1
PNKP-229ENST00000637897 DDX11L8A8MPP1 907 aa8.79□□□□□ -1
PNKP-229ENST00000637897 PER2O15055 1255 aa8.79□□□□□ -1
PNKP-229ENST00000637897 TBX3O15119 743 aa8.79□□□□□ -1
PNKP-229ENST00000637897 MBTPS2O43462 519 aa8.79□□□□□ -1
PNKP-229ENST00000637897 CDKL5O76039 1030 aa8.79□□□□□ -1
PNKP-229ENST00000637897 FGF18O76093 207 aa8.79□□□□□ -1
PNKP-229ENST00000637897 STAG3L1P0CL83 205 aa8.79□□□□□ -1
PNKP-229ENST00000637897 SPATA31C1P0DKV0 1188 aa8.79□□□□□ -1
PNKP-229ENST00000637897 QARSP47897 775 aaKnown RBP8.79□□□□□ -1
PNKP-229ENST00000637897 GUCY1B3Q02153 619 aa8.79□□□□□ -1
PNKP-229ENST00000637897 CYP4A11Q02928 519 aa8.79□□□□□ -1
PNKP-229ENST00000637897 ZP2Q05996 745 aa8.79□□□□□ -1
PNKP-229ENST00000637897 EPHA7Q15375 998 aa8.79□□□□□ -1
PNKP-229ENST00000637897 CLUL1Q15846 466 aa8.79□□□□□ -1
PNKP-229ENST00000637897 ECM1Q16610 540 aa8.79□□□□□ -1
PNKP-229ENST00000637897 PTPROQ16827 1216 aa8.79□□□□□ -1
PNKP-229ENST00000637897 AAK1Q2M2I8 961 aa8.79□□□□□ -1
PNKP-229ENST00000637897 CPLX2Q6PUV4 134 aaKnown RBP8.79□□□□□ -1
PNKP-229ENST00000637897 C4orf19Q8IY42 314 aa8.79□□□□□ -1
PNKP-229ENST00000637897 DIS3L2Q8IYB7 885 aaKnown RBP8.79□□□□□ -1
PNKP-229ENST00000637897 C4orf32Q8N8J7 132 aa8.79□□□□□ -1
PNKP-229ENST00000637897 TMEM143Q96AN5 459 aa8.79□□□□□ -1
PNKP-229ENST00000637897 LXNQ9BS40 222 aa8.79□□□□□ -1
PNKP-229ENST00000637897 TRAIPQ9BWF2 469 aa8.79□□□□□ -1
PNKP-229ENST00000637897 VN1R3Q9BXE9 311 aa8.79□□□□□ -1
PNKP-229ENST00000637897 CLDND1Q9NY35 253 aa8.79□□□□□ -1
PNKP-229ENST00000637897 SUCLA2Q9P2R7 463 aaPredicted RBP8.79□□□□□ -1
PNKP-229ENST00000637897 CDH22Q9UJ99 828 aa8.79□□□□□ -1
PNKP-229ENST00000637897 TECTAO75443 2155 aa8.79□□□□□ -1
PNKP-229ENST00000637897 HIDE1A8MVS5 230 aa8.78□□□□□ -1
PNKP-229ENST00000637897 PI4K2BG5E9Z4 385 aa8.78□□□□□ -1
PNKP-229ENST00000637897 P4HBP07237 508 aaKnown RBP8.78□□□□□ -1
PNKP-229ENST00000637897 GCFC2P16383 781 aaKnown RBP8.78□□□□□ -1
PNKP-229ENST00000637897 YWHABP31946 246 aaKnown RBP8.78□□□□□ -1
PNKP-229ENST00000637897 KRT2P35908 639 aa8.78□□□□□ -1
PNKP-229ENST00000637897 PHKA2P46019 1235 aa8.78□□□□□ -1
PNKP-229ENST00000637897 ANKRD1Q15327 319 aa8.78□□□□□ -1
PNKP-229ENST00000637897 AMHR2Q16671 573 aa8.78□□□□□ -1
PNKP-229ENST00000637897 LONRF3Q496Y0 759 aa8.78□□□□□ -1
PNKP-229ENST00000637897 NAALADL2Q58DX5 795 aa8.78□□□□□ -1
PNKP-229ENST00000637897 NCAPH2Q6IBW4 605 aa8.78□□□□□ -1
PNKP-229ENST00000637897 AGMOQ6ZNB7 445 aa8.78□□□□□ -1
PNKP-229ENST00000637897 RBM23Q86U06 439 aaKnown RBP8.78□□□□□ -1
PNKP-229ENST00000637897 RHPN2Q8IUC4 686 aa8.78□□□□□ -1
PNKP-229ENST00000637897 CCDC83Q8IWF9 413 aa8.78□□□□□ -1
PNKP-229ENST00000637897 HELQQ8TDG4 1101 aa8.78□□□□□ -1
PNKP-229ENST00000637897 ASAP3Q8TDY4 903 aa8.78□□□□□ -1
PNKP-229ENST00000637897 PRPF31Q8WWY3 499 aaKnown RBP8.78□□□□□ -1
PNKP-229ENST00000637897 MAP7D2Q96T17 732 aa8.78□□□□□ -1
PNKP-229ENST00000637897 EIF2AK1Q9BQI3 630 aaKnown RBP8.78□□□□□ -1
PNKP-229ENST00000637897 TMEM117Q9H0C3 514 aa8.78□□□□□ -1
PNKP-229ENST00000637897 IGFLR1Q9H665 355 aa8.78□□□□□ -1
PNKP-229ENST00000637897 ATP6V0A4Q9HBG4 840 aa8.78□□□□□ -1
PNKP-229ENST00000637897 RWDD3Q9Y3V2 267 aa8.78□□□□□ -1
PNKP-229ENST00000637897 FAM86C2PA6NEL3 165 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 POTEMA6NI47 508 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 TTLL13PA6NNM8 815 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 NT5C1B-RDH14C9J2C7 533 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 MED24O75448 989 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 OFD1O75665 1012 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 LYPLA2O95372 231 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 EYA4O95677 639 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 EDN1P05305 212 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 TMOD1P28289 359 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 ARL2P36404 184 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 NRIP1P48552 1158 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 TOB1P50616 345 aaPredicted RBP8.77□□□□□ -1.01
PNKP-229ENST00000637897 PLCB3Q01970 1234 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 LAMTOR4Q0VGL1 99 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 SMAD2Q15796 467 aaKnown RBP8.77□□□□□ -1.01
PNKP-229ENST00000637897 IL17AQ16552 155 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 DUSP6Q16828 381 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 KCNT2Q6UVM3 1135 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 FERMT3Q86UX7 667 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 GJD3Q8N144 294 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 SLC39A11Q8N1S5 342 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 EFHBQ8N7U6 833 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 SMG8Q8ND04 991 aaKnown RBP8.77□□□□□ -1.01
PNKP-229ENST00000637897 NLRP7Q8WX94 980 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 CEP170P1Q96L14 293 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms