RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 MARCKSP29966 332 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ECHS1P30084 290 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 HALP42357 657 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 PPARAQ07869 468 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 NSUN2Q08J23 767 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ZBTB17Q13105 803 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 FIGNQ5HY92 759 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 WDR59Q6PJI9 974 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 SLC2A7Q6PXP3 512 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ZC3H18Q86VM9 953 aaKnown RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 CCNJLQ8IV13 435 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 NUP93Q8N1F7 819 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 KIF2BQ8N4N8 673 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 FNDC8Q8TC99 324 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 UTP4Q969X6 686 aaKnown RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 AGBL1Q96MI9 1066 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 TMEM109Q9BVC6 243 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 OSBPL10Q9BXB5 764 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ASCC2Q9H1I8 757 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 RWDD2AQ9UIY3 292 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 CARD8Q9Y2G2 431 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 FAM32AQ9Y421 112 aaKnown RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ATP6V0A2Q9Y487 856 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 TTC26A0AVF1 554 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 POTEFA5A3E0 1075 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 RCCD1A6NED2 376 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 CCDC169A6NNP5 214 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 H0YIN7 160 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 RNF225M0QZC1 329 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 BACH1O14867 736 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 SERPINB7O75635 380 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 AFPP02771 609 aaKnown RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 POTEIP0CG38 1075 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 RASA1P20936 1047 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 IARSP41252 1262 aaKnown RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 MATR3P43243 847 aaKnown RBP eCLIP8.48□□□□□ -1.056e-6■■■■□ 21.9
CDKL5-211ENST00000637881 CASP7P55210 303 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 RHBDL3P58872 404 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 RTP1P59025 263 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 FOXO4P98177 505 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 CAMK2BQ13554 666 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 CCDC6Q16204 474 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 TCP11X2Q5H9J9 407 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 NFRKBQ6P4R8 1299 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 BTNL9Q6UXG8 535 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 B3GNT6Q6ZMB0 384 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 MAEAQ7L5Y9 396 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 DAAM2Q86T65 1068 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 C2CD5Q86YS7 1000 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 FAM13CQ8NE31 585 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 RPGRQ92834 1020 aaKnown RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ABTB1Q969K4 478 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 KAZALD1Q96I82 304 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 VPS50Q96JG6 964 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ZNF184Q99676 751 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 BRIP1Q9BX63 1249 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 DHX36Q9H2U1 1008 aaKnown RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 NHEJ1Q9H9Q4 299 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ETNK1Q9HBU6 452 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 SEC31BQ9NQW1 1179 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 UBAP1Q9NZ09 502 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 ZNF180Q9UJW8 692 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 FBXL5Q9UKA1 691 aa8.48□□□□□ -1.05
CDKL5-211ENST00000637881 TTC7AQ9ULT0 858 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-211ENST00000637881 PDS5AQ29RF7 1337 aaKnown RBP8.47□□□□□ -1.05
CDKL5-211ENST00000637881 UMODL1Q5DID0 1318 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 PPP1R3GB7ZBB8 358 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 KIF28PB7ZC32 967 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 CYP21A2P08686 494 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 FUT4P22083 530 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 HNRNPH3P31942 346 aaKnown RBP8.47□□□□□ -1.05
CDKL5-211ENST00000637881 CA8P35219 290 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 CTSWP56202 376 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 PLCB3Q01970 1234 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 SLC34A1Q06495 639 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 SAFBQ15424 915 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDKL5-211ENST00000637881 CNGA3Q16281 694 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 SMUG1Q53HV7 270 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 SH3D19Q5HYK7 790 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 TCERG1LQ5VWI1 586 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 FAAH2Q6GMR7 532 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 PHLDB3Q6NSJ2 640 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 Q6ZNX1 250 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 LRRC74BQ6ZQY2 392 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 TAOK1Q7L7X3 1001 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 TMC3Q7Z5M5 1100 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 PHLDB2Q86SQ0 1253 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 ZBED8Q8IZ13 594 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 MB21D1Q8N884 522 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 TTLL11Q8NHH1 800 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 UBLCP1Q8WVY7 318 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-211ENST00000637881 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
CDKL5-211ENST00000637881 MPP4Q96JB8 637 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-211ENST00000637881 UBAC1Q9BSL1 405 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 ADAM7Q9H2U9 754 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 GREM2Q9H772 168 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 SYNCQ9H7C4 482 aa8.47□□□□□ -1.05
CDKL5-211ENST00000637881 PARVBQ9HBI1 364 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms