RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 TTC17Q96AE7 1141 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 C11orf70Q9BRQ4 267 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 HESX1Q9UBX0 185 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 ZNF233A6NK53 670 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 GOLGA8MH3BSY2 632 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 RPS6KA4O75676 772 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 PRELPP51888 382 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 MTERF2Q49AM1 385 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 SMIM5Q71RC9 77 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 DCAF4Q8WV16 495 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 CDKL2Q92772 493 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 DCTN4Q9UJW0 460 aa17.01■□□□□ 0.31
CLN5-218ENST00000637397 EMSYQ7Z589 1322 aa17■□□□□ 0.31
CLN5-218ENST00000637397 A0A087X0T9 212 aa17■□□□□ 0.31
CLN5-218ENST00000637397 TCP11X1B4DZS4 312 aa17■□□□□ 0.31
CLN5-218ENST00000637397 GMNNO75496 209 aa17■□□□□ 0.31
CLN5-218ENST00000637397 FAM228BP0C875 321 aa17■□□□□ 0.31
CLN5-218ENST00000637397 USP11P51784 963 aa17■□□□□ 0.31
CLN5-218ENST00000637397 ZNF394Q53GI3 561 aa17■□□□□ 0.31
CLN5-218ENST00000637397 PDXDC2PQ6P474 469 aa17■□□□□ 0.31
CLN5-218ENST00000637397 DARS2Q6PI48 645 aaKnown RBP17■□□□□ 0.31
CLN5-218ENST00000637397 EIF2AK1Q9BQI3 630 aaKnown RBP17■□□□□ 0.31
CLN5-218ENST00000637397 COA1Q9GZY4 146 aa17■□□□□ 0.31
CLN5-218ENST00000637397 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
CLN5-218ENST00000637397 NIM1KQ8IY84 436 aa17■□□□□ 0.31
CLN5-218ENST00000637397 WDR3Q9UNX4 943 aaKnown RBP eCLIP17■□□□□ 0.31
CLN5-218ENST00000637397 SLC16A4O15374 487 aa17■□□□□ 0.31
CLN5-218ENST00000637397 EARS2Q5JPH6 523 aaKnown RBP17■□□□□ 0.31
CLN5-218ENST00000637397 GSDMBQ8TAX9 411 aa17■□□□□ 0.31
CLN5-218ENST00000637397 CCT6BQ92526 530 aa17■□□□□ 0.31
CLN5-218ENST00000637397 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
CLN5-218ENST00000637397 ISCUQ9H1K1 167 aa17■□□□□ 0.31
CLN5-218ENST00000637397 PPP1R9AQ9ULJ8 1098 aa17■□□□□ 0.31
CLN5-218ENST00000637397 CFAP73A6NFT4 308 aa17■□□□□ 0.31
CLN5-218ENST00000637397 F5H6K3 240 aa17■□□□□ 0.31
CLN5-218ENST00000637397 KLRC3Q07444 240 aa17■□□□□ 0.31
CLN5-218ENST00000637397 TRIM42Q8IWZ5 723 aa17■□□□□ 0.31
CLN5-218ENST00000637397 KCTD6Q8NC69 237 aa17■□□□□ 0.31
CLN5-218ENST00000637397 USH1CQ9Y6N9 552 aa17■□□□□ 0.31
CLN5-218ENST00000637397 BAZ2BQ9UIF8 2168 aaKnown RBP17■□□□□ 0.31
CLN5-218ENST00000637397 TNS3Q68CZ2 1445 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 GYG2O15488 501 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 PDHA1P08559 390 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 MIGA2Q7L4E1 593 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 SYT2Q8N9I0 419 aaPredicted RBP16.99■□□□□ 0.31
CLN5-218ENST00000637397 TUBB6Q9BUF5 446 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.99■□□□□ 0.31
CLN5-218ENST00000637397 PPLO60437 1756 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
CLN5-218ENST00000637397 CPP00450 1065 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 CYTH2Q99418 400 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 TRIM55Q9BYV6 548 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 YIPF3Q9GZM5 350 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 WNT8AQ9H1J5 351 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 DBR1Q9UK59 544 aaKnown RBP16.99■□□□□ 0.31
CLN5-218ENST00000637397 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 MAP3K7O43318 606 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 TJP3O95049 919 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 SEPT6Q14141 434 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 NME8Q8N427 588 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 AGPAT1Q99943 283 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 ZWILCHQ9H900 591 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 IFT122Q9HBG6 1241 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 KCND1Q9NSA2 647 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 REEP2Q9BRK0 252 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 NRBP2Q9NSY0 501 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 MTMR4Q9NYA4 1195 aa16.99■□□□□ 0.31
CLN5-218ENST00000637397 CLTCQ00610 1675 aaKnown RBP16.99■□□□□ 0.31
CLN5-218ENST00000637397 SYNJ2BP-COX16A0A087WUM0 186 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 TOM1L1O75674 476 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 HSD17B3P37058 310 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 PMS1P54277 932 aaKnown RBP16.98■□□□□ 0.31
CLN5-218ENST00000637397 COG7P83436 770 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 CASKIN2Q8WXE0 1202 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 COX16Q9P0S2 106 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 SCINQ9Y6U3 715 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 KIF3CO14782 793 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 CAV1Q03135 178 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 SAAL1Q96ER3 474 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 MIS12Q9H081 205 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 KBTBD4Q9NVX7 518 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 SEL1LQ9UBV2 794 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 TECPR2O15040 1411 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 A0A087X0B3 334 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 A0A0U1RQJ8 604 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 SPAG7O75391 227 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 RASA1P20936 1047 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 CASP7P55210 303 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 KRT17Q04695 432 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 SH2D4BQ5SQS7 431 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 SCARA5Q6ZMJ2 495 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 SCYL1Q96KG9 808 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 Q9H521 79 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 ARHGAP20Q9P2F6 1191 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 PFASO15067 1338 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 SHPRHQ149N8 1683 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 KIF20BQ96Q89 1820 aa16.98■□□□□ 0.31
CLN5-218ENST00000637397 INO80B-WBP1J3KQ70 363 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms