RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PHLPP2Q6ZVD8 1323 aa16.88■□□□□ 0.29
CLN6-219ENST00000637329 IGKV6-21A0A0C4DH24 114 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 LGALS16A8MUM7 142 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 ZBTB42B2RXF5 422 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 ADCY6O43306 1168 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 TBC1D8O95759 1140 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 CYBAP13498 195 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
CLN6-219ENST00000637329 NR2F2P24468 414 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 MARK3P27448 753 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 HOXD10P28358 340 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 FLT3LGP49771 235 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 FXR1P51114 621 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLN6-219ENST00000637329 GSDMDP57764 484 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 PRKCZQ05513 592 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 NR1I3Q14994 352 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 BRDTQ58F21 947 aaPredicted RBP16.87■□□□□ 0.29
CLN6-219ENST00000637329 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 TMEM161BQ8NDZ6 487 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 ZNF296Q8WUU4 475 aaPredicted RBP16.87■□□□□ 0.29
CLN6-219ENST00000637329 C16orf70Q9BSU1 422 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 KMT5AQ9NQR1 393 aa16.87■□□□□ 0.29
CLN6-219ENST00000637329 N4BP3O15049 544 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 TGFB1I1O43294 461 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 NR3C1P04150 777 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 ARL2P36404 184 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 MTIF2P46199 727 aaKnown RBP16.86■□□□□ 0.29
CLN6-219ENST00000637329 PPP2R3AQ06190 1150 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 ZC2HC1CQ53FD0 456 aaPredicted RBP16.86■□□□□ 0.29
CLN6-219ENST00000637329 IER5Q5VY09 327 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 SPECC1LQ69YQ0 1117 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 SPC24Q8NBT2 197 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 BSNDQ8WZ55 320 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 TRIB2Q92519 343 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 TUBGCP2Q9BSJ2 902 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 MKNK1Q9BUB5 465 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 POLD4Q9HCU8 107 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 AGPAT3Q9NRZ7 376 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 TAB2Q9NYJ8 693 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 ARHGAP28Q9P2N2 729 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 DOCK3Q8IZD9 2030 aa16.86■□□□□ 0.29
CLN6-219ENST00000637329 A0A1W2PQC6 194 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 CCDC169A6NNP5 214 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 H3BRB1 525 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 DLL1O00548 723 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 SLC16A4O15374 487 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
CLN6-219ENST00000637329 F2P00734 622 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 ZNF286BP0CG31 522 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 PBX1P40424 430 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 ADAM9Q13443 819 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 TRIM14Q14142 442 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 MXD4Q14582 209 aaPredicted RBP16.85■□□□□ 0.29
CLN6-219ENST00000637329 ARHGEF6Q15052 776 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 MAN2A1Q16706 1144 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 CCDC40Q4G0X9 1142 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 TMC6Q7Z403 805 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 SYCP3Q8IZU3 236 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 RETREG2Q8NC44 543 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 CCDC150Q8NCX0 1101 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 ERO1AQ96HE7 468 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 AP5M1Q9H0R1 490 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 TUT1Q9H6E5 874 aaKnown RBP16.85■□□□□ 0.29
CLN6-219ENST00000637329 METTL14Q9HCE5 456 aaKnown RBP16.85■□□□□ 0.29
CLN6-219ENST00000637329 SRRDQ9UH36 339 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 GABRQQ9UN88 632 aa16.85■□□□□ 0.29
CLN6-219ENST00000637329 DENND3A2RUS2 1198 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 MAGEB2O15479 319 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 DUSP11O75319 330 aaKnown RBP16.84■□□□□ 0.29
CLN6-219ENST00000637329 C22orf31O95567 290 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 EPB41P11171 864 aaKnown RBP16.84■□□□□ 0.29
CLN6-219ENST00000637329 GLRA2P23416 452 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 DNM2P50570 870 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 KCNA1Q09470 495 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 PRAMEF19Q5SWL8 479 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 FRMD5Q7Z6J6 570 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 PSPC1Q8WXF1 523 aaKnown RBP16.84■□□□□ 0.29
CLN6-219ENST00000637329 KATNAL1Q9BW62 490 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 TBX20Q9UMR3 447 aa16.84■□□□□ 0.29
CLN6-219ENST00000637329 GPR25O00155 361 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 DYNC1LI2O43237 492 aaPredicted RBP16.83■□□□□ 0.28
CLN6-219ENST00000637329 KPNA6O60684 536 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 PTGS1P23219 599 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 EFNA5P52803 228 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 PRMT2P55345 433 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 NKX3-2P78367 333 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 HSP90AA2PQ14568 343 aaPredicted RBP16.83■□□□□ 0.28
CLN6-219ENST00000637329 MIIPQ5JXC2 388 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 FKBP15Q5T1M5 1219 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 CDCA2Q69YH5 1023 aaPredicted RBP16.83■□□□□ 0.28
CLN6-219ENST00000637329 ADGRA3Q8IWK6 1321 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 TRIM59Q8IWR1 403 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 DEPTORQ8TB45 409 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 ASAP3Q8TDY4 903 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 TMEM143Q96AN5 459 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 IQCDQ96DY2 449 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 NOC4LQ9BVI4 516 aaKnown RBP16.83■□□□□ 0.28
CLN6-219ENST00000637329 UPF3AQ9H1J1 476 aaKnown RBP16.83■□□□□ 0.28
CLN6-219ENST00000637329 C2orf40Q9H1Z8 148 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms