RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 HERVK_113Q902F9 699 aa10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 PNMA5Q96PV4 448 aa10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 FDXACB1Q9BRP7 624 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 PANK2Q9BZ23 570 aa10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 POLR3FQ9H1D9 316 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 NUP62CLQ9H1M0 184 aa10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 CDHR5Q9HBB8 845 aa10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 DACT1Q9NYF0 836 aa10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 SLC4A7Q9Y6M7 1214 aa10.2□□□□□ -0.78
CACNA1A-239ENST00000637297 GPR32O75388 356 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 ZSCAN20P17040 1043 aaPredicted RBP10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 PLCG1P19174 1290 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 EIF4BP23588 611 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 CD52P31358 61 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 STAT6P42226 847 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 LAMTOR4Q0VGL1 99 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 GPNMBQ14956 572 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 PPP2R5AQ15172 486 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 TMEM119Q4V9L6 283 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 PLEKHG4Q58EX7 1191 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 ADALQ6DHV7 355 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 RINT1Q6NUQ1 792 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 USP49Q70CQ1 688 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 KSR1Q8IVT5 923 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 PDILTQ8N807 584 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 SYT2Q8N9I0 419 aaPredicted RBP10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 FSIP1Q8NA03 581 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 RNF149Q8NC42 400 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 MRPS27Q92552 414 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 IFT74Q96LB3 600 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 FTHL17Q9BXU8 183 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 TNMDQ9H2S6 317 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 CLSTN2Q9H4D0 955 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 XPNPEP1Q9NQW7 623 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 PADI3Q9ULW8 664 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 PCDHA7Q9UN72 937 aa10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 NOC2LQ9Y3T9 749 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-239ENST00000637297 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 DENND3A2RUS2 1198 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 LRRIQ4A6NIV6 560 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 AMHP03971 560 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 DARSP14868 501 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 SFPQP23246 707 aaKnown RBP eCLIP10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 ARL2P36404 184 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 PHKA2P46019 1235 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 FAM160A1Q05DH4 1040 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 NCBP1Q09161 790 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 MCM6Q14566 821 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 SV2BQ7L1I2 683 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 KCNK18Q7Z418 384 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 SRGAP1Q7Z6B7 1085 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 ZBTB8OSQ8IWT0 167 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 LARP4BQ92615 738 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 RAD54LQ92698 747 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 KIFAP3Q92845 792 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 DRC1Q96MC2 740 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 PYM1Q9BRP8 204 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 TIPINQ9BVW5 301 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 ADAMTS10Q9H324 1103 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 PRO3102Q9H379 93 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 AGO3Q9H9G7 860 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 GPRC5CQ9NQ84 441 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 KCND2Q9NZV8 630 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 STK17AQ9UEE5 414 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 KCNG1Q9UIX4 513 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 ST3GAL5Q9UNP4 418 aa10.18□□□□□ -0.78
CACNA1A-239ENST00000637297 CCDC169A6NNP5 214 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 INO80B-WBP1J3KQ70 363 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 KINO60870 393 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 HIP1RO75146 1068 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 NR1I2O75469 434 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 ERLIN2O94905 339 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 CCDC192P0DO97 292 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 ATP2A2P16615 1042 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 IBSPP21815 317 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 RAD51AP2Q09MP3 1159 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 TMEM132AQ24JP5 1023 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 FAM43BQ6ZT52 329 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 C1orf186Q6ZWK4 172 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 CATSPER4Q7RTX7 472 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 GPBP1Q86WP2 473 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 MYOCDQ8IZQ8 938 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 IQUBQ8NA54 791 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 DEPTORQ8TB45 409 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 ASAP3Q8TDY4 903 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 TMEM40Q8WWA1 233 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 SLC9A7Q96T83 725 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 RBSNQ9H1K0 784 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 ZHX3Q9H4I2 956 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 POLD4Q9HCU8 107 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 RNF216Q9NWF9 866 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 CXXC1Q9P0U4 656 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 GBF1Q92538 1859 aa10.17□□□□□ -0.78
CACNA1A-239ENST00000637297 ENPP3O14638 875 aa10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 TBCAO75347 108 aaKnown RBP10.16□□□□□ -0.78
CACNA1A-239ENST00000637297 CSDE1O75534 798 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms