RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	KCNT2	Q6UVM3	1135 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	B4GALNT4	Q76KP1	1039 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZNF765	Q7L2R6	523 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	BEND5	Q7L4P6	421 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	DHX32	Q7L7V1	743 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	OTUD6A	Q7L8S5	288 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	OTOP1	Q7RTM1	612 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	OVCH1	Q7RTY7	1134 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PRPF39	Q86UA1	669 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	C2CD5	Q86YS7	1000 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CMIP	Q8IY22	773 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	NUP93	Q8N1F7	819 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZNF687	Q8N1G0	1237 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TXLNB	Q8N3L3	684 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TMCO5A	Q8N6Q1	288 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	MARCH10	Q8NA82	808 aa	Predicted RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	MIGA1	Q8NAN2	632 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	FANCB	Q8NB91	859 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SIMC1	Q8NDZ2	872 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ADCY4	Q8NFM4	1077 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TTLL11	Q8NHH1	800 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CEP70	Q8NHQ1	597 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PCDH19	Q8TAB3	1148 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	KLHDC4	Q8TBB5	520 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	FNIP1	Q8TF40	1166 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TBC1D22A	Q8WUA7	517 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TGFBRAP1	Q8WUH2	860 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	HERVK_113	Q902F9	699 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	FBXW5	Q969U6	566 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	JAKMIP2	Q96AA8	810 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	NSUN4	Q96CB9	384 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ACSF2	Q96CM8	615 aa	Predicted RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	RRP36	Q96EU6	259 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CEP95	Q96GE4	821 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	C1orf159	Q96HA4	380 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	FEM1C	Q96JP0	617 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	GAS2L1	Q99501	681 aa	Predicted RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	POP1	Q99575	1024 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PTPN18	Q99952	460 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CORO1B	Q9BR76	489 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	LRFN3	Q9BTN0	628 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PHF20	Q9BVI0	1012 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	LGR4	Q9BXB1	951 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZCCHC2	Q9C0B9	1178 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	WNT10A	Q9GZT5	417 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SIL1	Q9H173	461 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PDCL3	Q9H2J4	239 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	RASSF4	Q9H2L5	321 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CRISPLD1	Q9H336	500 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	GP6	Q9HCN6	339 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TIMMDC1	Q9NPL8	285 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SERHL	Q9NQF3	203 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TM7SF3	Q9NS93	570 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PIH1D1	Q9NWS0	290 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	POGK	Q9P215	609 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	USP36	Q9P275	1121 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TBC1D29	Q9UFV1	150 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	MOSPD1	Q9UJG1	213 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	GTF3C4	Q9UKN8	822 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ARHGAP26	Q9UNA1	814 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SMC3	Q9UQE7	1217 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SF3B6	Q9Y3B4	125 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZNF711	Q9Y462	761 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ATP6V0A2	Q9Y487	856 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SNX8	Q9Y5X2	465 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	FHOD1	Q9Y613	1164 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293		A0A088AWK7	358 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293		A0A1W2PPC4	97 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	PRAMEF27	A3QJZ7	478 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	LRRC14B	A6NHZ5	514 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	FAM47E-STBD1	D6RA91	191 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	GTPBP1	O00178	669 aa	Known RBP	2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	IPO5	O00410	1097 aa	Known RBP	2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	PLOD2	O00469	737 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	NPC1	O15118	1278 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	SLC16A6	O15403	523 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	MEFV	O15553	781 aa	Predicted RBP	2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	SIAH2	O43255	324 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	GABBR2	O75899	941 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	UBOX5	O94941	541 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	CHGB	P05060	677 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	CYP17A1	P05093	508 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	QDPR	P09417	244 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	SLFN14	P0C7P3	912 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	ZBTB48	P10074	688 aa	Predicted RBP	2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	ACADM	P11310	421 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	ESRRA	P11474	423 aa	Predicted RBP	2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	HARS	P12081	509 aa	Known RBP	2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	KRT13	P13646	458 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	TNNT1	P13805	278 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	PAM	P19021	973 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	ACTN2	P35609	894 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	LTBR	P36941	435 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	GGCX	P38435	758 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	ARL4D	P49703	201 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	TUB	P50607	506 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	CLCN2	P51788	898 aa		2.9	□□□□□ -1.95
GABRB3-223	ENST00000637293	BCAR1	P56945	870 aa		2.9	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms