RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 TMBIM4Q9HC24 238 aa17.44■□□□□ 0.38
CHRNA7-221ENST00000636898 PSME4Q14997 1843 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 ARHGEF35A5YM69 484 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 MAPTP10636 758 aaKnown RBP17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 PDCLQ13371 301 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 CCDC174Q6PII3 467 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 SLC30A10Q6XR72 485 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 CNKSR1Q969H4 720 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 RNPC3Q96LT9 517 aaKnown RBP17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 NAP1L3Q99457 506 aaPredicted RBP17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 CARD9Q9H257 536 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 ZBTB21Q9ULJ3 1066 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 ATXN2Q99700 1313 aaKnown RBP17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 ANKRD62A6NC57 917 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 H0YGN5 161 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 IPO5O00410 1097 aaKnown RBP17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 ARP10275 920 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 HADHBP55084 474 aaKnown RBP17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 MAPK7Q13164 816 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 CEP85LQ5SZL2 805 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 KSR1Q8IVT5 923 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 SUPT20HQ8NEM7 779 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 FAM151AQ8WW52 585 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 VCPKMTQ9H867 229 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 OSGEPQ9NPF4 335 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 AMACRQ9UHK6 382 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 NFS1Q9Y697 457 aa17.43■□□□□ 0.38
CHRNA7-221ENST00000636898 A0A087WUV0 522 aaPredicted RBP17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 P4HA2O15460 535 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 EXOC3O60645 756 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 MYZAPP0CAP1 466 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 TRIM49P0CI25 452 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 TRIM49CP0CI26 452 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 BCRP11274 1271 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 LSP1P33241 339 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 POU5F1Q01860 360 aaKnown RBP17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 ITGB3BPQ13352 177 aaPredicted RBP17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 INTS8Q75QN2 995 aaKnown RBP17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 B4GALNT4Q76KP1 1039 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 SPATS2Q86XZ4 545 aaKnown RBP17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 SYCP3Q8IZU3 236 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 ARFGAP2Q8N6H7 521 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 LMO3Q8TAP4 145 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 FAM114A2Q9NRY5 505 aa17.42■□□□□ 0.38
CHRNA7-221ENST00000636898 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 NDUFAB1O14561 156 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 DDX3YO15523 660 aaKnown RBP17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 HIP1RO75146 1068 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 ITGA4P13612 1032 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 TNFAIP3P21580 790 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 ATP1A2P50993 1020 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 BIRC3Q13489 604 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 PLS1Q14651 629 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 TCEAL1Q15170 157 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 UAP1Q16222 522 aaPredicted RBP17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 PTPROQ16827 1216 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 RUFY4Q6ZNE9 571 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 DAW1Q8N136 415 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 MXRA8Q9BRK3 442 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 EPN3Q9H201 632 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 TMEM206Q9H813 350 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 FEM1BQ9UK73 627 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 PPP1R9AQ9ULJ8 1098 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 UTP11Q9Y3A2 253 aaKnown RBP17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 CPP00450 1065 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 FGGP02679 453 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 KRT13P13646 458 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 PTENP60484 403 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 UBXN2AP68543 259 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 CETN1Q12798 172 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 SPDYCQ5MJ68 293 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 TTC19Q6DKK2 380 aaPredicted RBP17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 PHLDB3Q6NSJ2 640 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 RHOT2Q8IXI1 618 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 C12orf56Q8IXR9 622 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 LARSQ9P2J5 1176 aaKnown RBP17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 FAM169AQ9Y6X4 670 aa17.41■□□□□ 0.38
CHRNA7-221ENST00000636898 YDJCA8MPS7 323 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 TCP10L2B9ZVM9 353 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 CTNNA1P35221 906 aaKnown RBP17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 MDH1P40925 334 aaKnown RBP17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 HSD17B4P51659 736 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 NIPA1Q7RTP0 329 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 DDX42Q86XP3 938 aaKnown RBP eCLIP17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 PAGR1Q9BTK6 254 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 RAB17Q9H0T7 212 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 NEUROG2Q9H2A3 272 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 PFASO15067 1338 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 IGSF9BQ9UPX0 1349 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 MAPK13O15264 365 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 TTI1O43156 1089 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 DAPK3O43293 454 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 TBC1D12O60347 775 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 ABCB4P21439 1286 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 SKIDA1Q1XH10 827 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 PADI6Q6TGC4 694 aa17.4■□□□□ 0.38
CHRNA7-221ENST00000636898 TADA2BQ86TJ2 420 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms