RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 GRAMD1CQ8IYS0 662 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 NLRP7Q8WX94 980 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 BSNDQ8WZ55 320 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 PAGE5Q96GU1 130 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 SCLYQ96I15 445 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 ZNF668Q96K58 619 aaPredicted RBP17.71■□□□□ 0.43
CLN6-216ENST00000636876 IFT74Q96LB3 600 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 NLRP4Q96MN2 994 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 SCLT1Q96NL6 688 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 C7orf25Q9BPX7 421 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 TRIM9Q9C026 710 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 GINS2Q9Y248 185 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 SZT2Q5T011 3432 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 LTBP2Q14767 1821 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 A0A087WZ62 844 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 TBCAO75347 108 aaKnown RBP17.7■□□□□ 0.42
CLN6-216ENST00000636876 FAM13AO94988 1023 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 SRGAP2CP0DJJ0 459 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 ZNF131P52739 623 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 TFDP1Q14186 410 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 PPP2R5AQ15172 486 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 RNF149Q8NC42 400 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 TIGD1Q96MW7 591 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 OSMRQ99650 979 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 FDXACB1Q9BRP7 624 aaPredicted RBP17.7■□□□□ 0.42
CLN6-216ENST00000636876 C17orf75Q9HAS0 396 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 SIP14410 1827 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 MYH11P35749 1972 aa17.7■□□□□ 0.42
CLN6-216ENST00000636876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.69■□□□□ 0.42
CLN6-216ENST00000636876 LRRIQ4A6NIV6 560 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 SFI1A8K8P3 1242 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 KINO60870 393 aaKnown RBP17.69■□□□□ 0.42
CLN6-216ENST00000636876 PLS3P13797 630 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 MCM4P33991 863 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 RFC2P35250 354 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 NAMPTP43490 491 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 PHKA2P46019 1235 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 POU5F1BQ06416 359 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 GPNMBQ14956 572 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 FBXO47Q5MNV8 452 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 KANK3Q6NY19 840 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 TMEM199Q8N511 208 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 BADQ92934 168 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 CCDC34Q96HJ3 373 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 GCOM2Q9BZD3 368 aaPredicted RBP17.69■□□□□ 0.42
CLN6-216ENST00000636876 PARVGQ9HBI0 331 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 DACT1Q9NYF0 836 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 SQORQ9Y6N5 450 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
CLN6-216ENST00000636876 GTPBP6O43824 516 aaPredicted RBP17.68■□□□□ 0.42
CLN6-216ENST00000636876 NBNO60934 754 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 MYL1P05976 194 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 GHRP10912 638 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 IDEP14735 1019 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 DARSP14868 501 aaKnown RBP17.68■□□□□ 0.42
CLN6-216ENST00000636876 EIF4BP23588 611 aaKnown RBP17.68■□□□□ 0.42
CLN6-216ENST00000636876 CASP1P29466 404 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 NPTX2P47972 431 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 PEX3P56589 373 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 PTENP60484 403 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 ASIC1P78348 528 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 DMP1Q13316 513 aaPredicted RBP17.68■□□□□ 0.42
CLN6-216ENST00000636876 CUL4BQ13620 913 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 LPIN1Q14693 890 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 TSHZ1Q6ZSZ6 1077 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
CLN6-216ENST00000636876 TMEM40Q8WWA1 233 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 SPIRE2Q8WWL2 714 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
CLN6-216ENST00000636876 NFKBIZQ9BYH8 718 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 OSBPL7Q9BZF2 842 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 BLZF1Q9H2G9 400 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 ZHX3Q9H4I2 956 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 IFT122Q9HBG6 1241 aa17.68■□□□□ 0.42
CLN6-216ENST00000636876 LARSQ9P2J5 1176 aaKnown RBP17.68■□□□□ 0.42
CLN6-216ENST00000636876 FRMD3A2A2Y4 597 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 CXCL10P02778 98 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 CSF2RAP15509 400 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 GAP43P17677 238 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 FPGSQ05932 587 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 PPIGQ13427 754 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLN6-216ENST00000636876 ODR4Q5SWX8 454 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 CDCA2Q69YH5 1023 aaPredicted RBP17.67■□□□□ 0.42
CLN6-216ENST00000636876 SRGAP1Q7Z6B7 1085 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 MYCT1Q8N699 235 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 USP38Q8NB14 1042 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 TET1Q8NFU7 2136 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 DEPTORQ8TB45 409 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 VWCEQ96DN2 955 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 INO80BQ9C086 356 aaPredicted RBP17.67■□□□□ 0.42
CLN6-216ENST00000636876 C2orf40Q9H1Z8 148 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 PANK4Q9NVE7 773 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 KCNG1Q9UIX4 513 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 NOC2LQ9Y3T9 749 aaKnown RBP17.67■□□□□ 0.42
CLN6-216ENST00000636876 ADGRA3Q8IWK6 1321 aa17.67■□□□□ 0.42
CLN6-216ENST00000636876 CCDC169A6NNP5 214 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 CSDE1O75534 798 aaKnown RBP17.66■□□□□ 0.42
CLN6-216ENST00000636876 PRR29P0C7W0 189 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms