RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 COLGALT1Q8NBJ5 622 aa16.78■□□□□ 0.28
CACNA1A-230ENST00000636768 PSPC1Q8WXF1 523 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-230ENST00000636768 C8orf76Q96K31 380 aa16.78■□□□□ 0.28
CACNA1A-230ENST00000636768 LLPHQ9BRT6 129 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-230ENST00000636768 CHST12Q9NRB3 414 aa16.78■□□□□ 0.28
CACNA1A-230ENST00000636768 PIN4Q9Y237 131 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-230ENST00000636768 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
CACNA1A-230ENST00000636768 MUC3AQ02505 3323 aa16.78■□□□□ 0.28
CACNA1A-230ENST00000636768 EVPLQ92817 2033 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 A0A0U1RQF3 1178 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 FGF18O76093 207 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 IL9P15248 144 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 ATP2B1P20020 1258 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 IRS1P35568 1242 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 TXKP42681 527 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 UBE3AQ05086 875 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 EMC2Q15006 297 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 TWF2Q6IBS0 349 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 MICAL1Q8TDZ2 1067 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 ZSCAN31Q96LW9 406 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 CASD1Q96PB1 797 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 EIF2AK1Q9BQI3 630 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 DHX33Q9H6R0 707 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 CWH43Q9H720 699 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 TTC12Q9H892 705 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 RNF19AQ9NV58 838 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 FAM50BQ9Y247 325 aa16.77■□□□□ 0.28
CACNA1A-230ENST00000636768 GRXCR2A6NFK2 248 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 WNT7AO00755 349 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 GAS2O43903 313 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 EOMESO95936 686 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 MCM7P33993 719 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 GTF2F1P35269 517 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 HMGN5P82970 282 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 GNL2Q13823 731 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 CLLU1OSQ5K130 101 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 FAM184AQ8NB25 1140 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 HELQQ8TDG4 1101 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 TCP11Q8WWU5 503 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 PRPF31Q8WWY3 499 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 ZNF558Q96NG5 402 aa16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 SH2B1Q9NRF2 756 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-230ENST00000636768 LOXHD1Q8IVV2 1947 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 SLITRK3O94933 977 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 SRGAP2CP0DJJ0 459 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 SKIP12755 728 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 PHKA2P46019 1235 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 NRIP1P48552 1158 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 CLUL1Q15846 466 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 CTC1Q2NKJ3 1217 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 ADGRD2Q7Z7M1 963 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 RBM23Q86U06 439 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 ZNF598Q86UK7 904 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 MTRQ99707 1265 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 MRPL9Q9BYD2 267 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 IFT122Q9HBG6 1241 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 TLR9Q9NR96 1032 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 PCDHGC5Q9Y5F6 944 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 BRWD1Q9NSI6 2320 aa16.75■□□□□ 0.27
CACNA1A-230ENST00000636768 ZBTB39O15060 712 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 LINC01565O15544 149 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 ATF7P17544 494 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 SSTR3P32745 418 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 PPM1AP35813 382 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 LTBRP36941 435 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 NDUFV1P49821 464 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 RAB27AP51159 221 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 KCNT2Q6UVM3 1135 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 LRRC55Q6ZSA7 311 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 SRGAP1Q7Z6B7 1085 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 FAM178BQ8IXR5 827 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 MTMR9Q96QG7 549 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 KIF2CQ99661 725 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 HSD17B14Q9BPX1 270 aa16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 PUF60Q9UHX1 559 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 TCF20Q9UGU0 1960 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-230ENST00000636768 POTEMA6NI47 508 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 ASAP2O43150 1006 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 TBX10O75333 385 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 LYPLA2O95372 231 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 PBX3P40426 434 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 DLX2Q07687 328 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 ADAM15Q13444 863 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 LONRF3Q496Y0 759 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 FERMT3Q86UX7 667 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 GJD3Q8N144 294 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 EFHBQ8N7U6 833 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 RNF149Q8NC42 400 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 TRAIPQ9BWF2 469 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 TMEM60Q9H2L4 133 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 FOXP1Q9H334 677 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 TLE6Q9H808 572 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 ANKEF1Q9NU02 776 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 FAM105AQ9NUU6 356 aa16.73■□□□□ 0.27
CACNA1A-230ENST00000636768 LZTS1Q9Y250 596 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms