RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 MLXIPQ9HAP2 919 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 PASKQ96RG2 1323 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 HMGB1P1B2RPK0 211 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 NOP56O00567 594 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SLITRK3O94933 977 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 CHRNA3P32297 505 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 ACTN2P35609 894 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 STAT3P40763 770 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 TRPC3Q13507 836 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 C1orf186Q6ZWK4 172 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 POMGNT1Q8WZA1 660 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 WNT8AQ9H1J5 351 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 FAM196BA6NMK8 535 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 MOCS3O95396 460 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 TNNC2P02585 160 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 LRIG3Q6UXM1 1119 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 TAOK1Q7L7X3 1001 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 TMEM8AQ9HCN3 771 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ARHGAP20Q9P2F6 1191 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 L1RE1Q9UN81 338 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 FAM86B1E9PN63 330 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 FAM86B2P0C5J1 330 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 EIF2AK2P19525 551 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 PMS1P54277 932 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 MED15Q96RN5 788 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 PLCD4Q9BRC7 762 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SLC9A2Q9UBY0 812 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 NAGPAQ9UK23 515 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 CASZ1Q86V15 1759 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SMIM22K7EJ46 135 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 DDX39AO00148 427 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 TMOD1P28289 359 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 HERVK_113P62684 666 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 TNFAIP2Q03169 654 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SNRNP48Q6IEG0 339 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 RPAP3Q9H6T3 665 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 CNOT10Q9H9A5 744 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ZHX2Q9Y6X8 837 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 LAMA4Q16363 1823 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 WNK3Q9BYP7 1800 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ENC1O14682 589 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ATP1A1P05023 1023 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 CACNB1Q02641 598 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 EN1Q05925 392 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 FASTKD5Q7L8L6 764 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 AGPAT1Q99943 283 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SENP7Q9BQF6 1050 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 MYO1FO00160 1098 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 RTN2O75298 545 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ZRANB2O95218 330 aaKnown RBP eCLIP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 PTGER2P43116 358 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 PLS1Q14651 629 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SYTL5Q8TDW5 730 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 C7orf43Q8WVR3 580 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 JPH1Q9HDC5 661 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 VAV3Q9UKW4 847 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 DOCK2Q92608 1830 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ASB14A6NK59 587 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SRRM3A6NNA2 597 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 BUB1O43683 1085 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 VEGFAP15692 232 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 DRAP1Q14919 205 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 DNAJC21Q5F1R6 531 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SHISA4Q96DD7 197 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 WRNIP1Q96S55 665 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 GTF3C4Q9UKN8 822 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 COL24A1Q17RW2 1714 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SMAPO00193 183 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 WNT7AO00755 349 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 PALMO75781 387 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ATP2A2P16615 1042 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 TNNI1P19237 187 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 DSG3P32926 999 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 RWDD2BP57060 319 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 AMPD2Q01433 879 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SPP2Q13103 211 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 SLC35G1Q2M3R5 365 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 BEND6Q5SZJ8 279 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 PPM1KQ8N3J5 372 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 UNC45AQ9H3U1 944 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 FAM124BQ9H5Z6 455 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 PPCSQ9HAB8 311 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 IVNS1ABPQ9Y6Y0 642 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 K7ERI5 159 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 CLIC2O15247 247 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 GBP2P32456 591 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF280AP59817 542 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 GTF2BQ00403 316 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 MAP3K10Q02779 954 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 TTLL12Q14166 644 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 MXD4Q14582 209 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 ARHGAP44Q17R89 818 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 EPM2AIP1Q7L775 607 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 CLEC10AQ8IUN9 316 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 MICALL2Q8IY33 904 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 PIGOQ8TEQ8 1089 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 IFT81Q8WYA0 676 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 MMS19Q96T76 1030 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 DNAJC18Q9H819 358 aa4.92□□□□□ -1.62
SCN1A-210ENST00000635776 RAVER2Q9HCJ3 691 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms