RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 SRGAP2CP0DJJ0 459 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
CLN6-211ENST00000635754 PHKA2P46019 1235 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 ASAP3Q8TDY4 903 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 KIFAP3Q92845 792 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 GPRC5CQ9NQ84 441 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 KCND2Q9NZV8 630 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 STK17AQ9UEE5 414 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 PCDHA7Q9UN72 937 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 ST3GAL5Q9UNP4 418 aa17.17■□□□□ 0.34
CLN6-211ENST00000635754 GBF1Q92538 1859 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 AMHP03971 560 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 ATP2A2P16615 1042 aaKnown RBP17.16■□□□□ 0.34
CLN6-211ENST00000635754 GLRA2P23416 452 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 SLC12A3P55017 1021 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 CAPSQ13938 189 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 AXDND1Q5T1B0 1012 aaPredicted RBP17.16■□□□□ 0.34
CLN6-211ENST00000635754 RRAGBQ5VZM2 374 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 RINT1Q6NUQ1 792 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 CCDC73Q6ZRK6 1079 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 PHOSPHO2Q8TCD6 241 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 LEO1Q8WVC0 666 aaPredicted RBP17.16■□□□□ 0.34
CLN6-211ENST00000635754 LARP4BQ92615 738 aaKnown RBP17.16■□□□□ 0.34
CLN6-211ENST00000635754 RAD54LQ92698 747 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 CHAMP1Q96JM3 812 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 RUSC1Q9BVN2 902 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 TIPINQ9BVW5 301 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 IFT122Q9HBG6 1241 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 BLOC1S4Q9NUP1 217 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 MYH11P35749 1972 aa17.16■□□□□ 0.34
CLN6-211ENST00000635754 DEFB103AP81534 67 aa17.15■□□□□ 0.34
CLN6-211ENST00000635754 SMAD3P84022 425 aaKnown RBP17.15■□□□□ 0.34
CLN6-211ENST00000635754 DHX8Q14562 1220 aaKnown RBP17.15■□□□□ 0.34
CLN6-211ENST00000635754 PPP2R5AQ15172 486 aa17.15■□□□□ 0.34
CLN6-211ENST00000635754 C1orf186Q6ZWK4 172 aa17.15■□□□□ 0.34
CLN6-211ENST00000635754 SRGAP1Q7Z6B7 1085 aa17.15■□□□□ 0.34
CLN6-211ENST00000635754 DRC1Q96MC2 740 aa17.15■□□□□ 0.34
CLN6-211ENST00000635754 LAMA3Q16787 3333 aa17.14■□□□□ 0.34
CLN6-211ENST00000635754 DENND3A2RUS2 1198 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 LRRIQ4A6NIV6 560 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 CSDE1O75534 798 aaKnown RBP17.14■□□□□ 0.33
CLN6-211ENST00000635754 GUCY2CP25092 1073 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 STAT6P42226 847 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 PTENP60484 403 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 POU5F1BQ06416 359 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 MCM6Q14566 821 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 FAM109BQ6ICB4 259 aaPredicted RBP17.14■□□□□ 0.33
CLN6-211ENST00000635754 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.14■□□□□ 0.33
CLN6-211ENST00000635754 CATSPER4Q7RTX7 472 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 GPBP1Q86WP2 473 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 MYOCDQ8IZQ8 938 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 LRRC15Q8TF66 581 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 IFT74Q96LB3 600 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 TMX1Q9H3N1 280 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
CLN6-211ENST00000635754 RBM19Q9Y4C8 960 aaKnown RBP17.14■□□□□ 0.33
CLN6-211ENST00000635754 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.13■□□□□ 0.33
CLN6-211ENST00000635754 HIP1RO75146 1068 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 ZSCAN20P17040 1043 aaPredicted RBP17.13■□□□□ 0.33
CLN6-211ENST00000635754 FGFR4P22455 802 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 RAD51AP2Q09MP3 1159 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 IFNLR1Q8IU57 520 aaPredicted RBP17.13■□□□□ 0.33
CLN6-211ENST00000635754 PDILTQ8N807 584 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 TSPYL2Q9H2G4 693 aaPredicted RBP17.13■□□□□ 0.33
CLN6-211ENST00000635754 FAM13BQ9NYF5 915 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 CHMP5Q9NZZ3 219 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 LAMA2P24043 3122 aaKnown RBP17.13■□□□□ 0.33
CLN6-211ENST00000635754 GRXCR1A8MXD5 290 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 SOX1O00570 391 aaPredicted RBP17.13■□□□□ 0.33
CLN6-211ENST00000635754 ENPP3O14638 875 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 ERLIN2O94905 339 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 NAMPTP43490 491 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.33
CLN6-211ENST00000635754 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 HERC6Q8IVU3 1022 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 ZBTB8OSQ8IWT0 167 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 LINC01599Q8WXQ3 324 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 BSNDQ8WZ55 320 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 ADAM2Q99965 735 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 ZBED2Q9BTP6 218 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 PANK2Q9BZ23 570 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 C2orf40Q9H1Z8 148 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 MINDY3Q9H8M7 445 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 POLD4Q9HCU8 107 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 C1orf112Q9NSG2 853 aa17.13■□□□□ 0.33
CLN6-211ENST00000635754 A0A087X0B3 334 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 MGEA5O60502 916 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 KRT18P05783 430 aaKnown RBP17.12■□□□□ 0.33
CLN6-211ENST00000635754 MAPK7Q13164 816 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 DMP1Q13316 513 aaPredicted RBP17.12■□□□□ 0.33
CLN6-211ENST00000635754 RAB30Q15771 203 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 NAALADL2Q58DX5 795 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 ARSHQ5FYA8 562 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 CDCA2Q69YH5 1023 aaPredicted RBP17.12■□□□□ 0.33
CLN6-211ENST00000635754 ADALQ6DHV7 355 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 SV2BQ7L1I2 683 aa17.12■□□□□ 0.33
CLN6-211ENST00000635754 RTN4RL1Q86UN2 441 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms