RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ERVK-21P61565 698 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 NKX3-2P78367 333 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 SMAD3P84022 425 aaKnown RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 OCRLQ01968 901 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 TUSC3Q13454 348 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 MTMR1Q13613 665 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 RAPGEF1Q13905 1077 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 SMAD2Q15796 467 aaKnown RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 INAVAQ3KP66 663 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 L1TD1Q5T7N2 865 aaKnown RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 CD300LDQ6UXZ3 194 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 TRIM48Q8IWZ4 208 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 RBM12BQ8IXT5 1001 aaKnown RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 KIAA1958Q8N8K9 716 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 TXNDC5Q8NBS9 432 aaKnown RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 ARRDC4Q8NCT1 418 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 C16orf92Q96LL3 132 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 MPHOSPH6Q99547 160 aaKnown RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 ELF4Q99607 663 aaPredicted RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 YIPF4Q9BSR8 244 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 SSBP3Q9BWW4 388 aaPredicted RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 ZMAT4Q9H898 229 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 CHST12Q9NRB3 414 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 KCNH7Q9NS40 1196 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 SLC5A4Q9NY91 659 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 ZNF69Q9UC07 566 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 PUF60Q9UHX1 559 aaKnown RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 LZTS1Q9Y250 596 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 ATP23Q9Y6H3 246 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 SCDO00767 359 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CYP1A1P04798 512 aaPredicted RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 FAHP16930 419 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 SLC9A1P19634 815 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 FNTBP49356 437 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 KIF11P52732 1056 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 HERVK_113P62684 666 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 TMPRSS15P98073 1019 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CNGB1Q14028 1251 aaPredicted RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 HLTFQ14527 1009 aaKnown RBP eCLIP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 SART3Q15020 963 aaKnown RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 TERF2Q15554 542 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 TMEM95Q3KNT9 176 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 ATP13A4Q4VNC1 1196 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 PAN2Q504Q3 1202 aaKnown RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 PRR31Q5SQ13 230 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CATSPEREQ5SY80 951 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 SYCP2LQ5T4T6 812 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 PRAMEF18Q5VWM3 479 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 BTBD8Q5XKL5 378 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 MCTP2Q6DN12 878 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 ESRP1Q6NXG1 681 aaKnown RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CRIP3Q6Q6R5 217 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 MILR1Q7Z6M3 343 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CIR1Q86X95 450 aaPredicted RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 PROSER1Q86XN7 944 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 RAVER1Q8IY67 606 aaKnown RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CHPFQ8IZ52 775 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CBARPQ8N350 705 aaPredicted RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 TTC30BQ8N4P2 665 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 ZNF610Q8N9Z0 462 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CLRN3Q8NCR9 226 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 COG1Q8WTW3 980 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 TSR2Q969E8 191 aaKnown RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 YTHDC1Q96MU7 727 aaKnown RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CLIC6Q96NY7 704 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 MENTQ9BUN1 341 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 RETREG1Q9H6L5 497 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 VTA1Q9NP79 307 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 ACSS2Q9NR19 701 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 DTLQ9NZJ0 730 aa3.59□□□□□ -1.83
PSPC1-208ENST00000635562 NOL7Q9UMY1 257 aaKnown RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 CTDP1Q9Y5B0 961 aaPredicted RBP3.59□□□□□ -1.83
PSPC1-208ENST00000635562 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 NPEPPSL1A6NEC2 478 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 FZD9O00144 591 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 DDX3XO00571 662 aaKnown RBP eCLIP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 GABRDO14764 452 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 TBX3O15119 743 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 HIP1RO75146 1068 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 KATNA1O75449 491 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 KRT37O76014 449 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 LRG1P02750 347 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 CYP17A1P05093 508 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 KRT18P05783 430 aaKnown RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 ZNF28P17035 718 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 PTX3P26022 381 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 AOAHP28039 575 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 ACVRL1P37023 503 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 SELENOPP49908 381 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 EPHB4P54760 987 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 SESN3P58005 492 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 FAPQ12884 760 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 MOGSQ13724 837 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 SIM2Q14190 667 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 LRRC32Q14392 662 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 EPHA7Q15375 998 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 ZNF174Q15697 407 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 NFE2Q16621 373 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms