RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 ACAP1Q15027 740 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 LPAL2Q16609 132 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 ZNF484Q5JVG2 852 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 TSSK4Q6SA08 328 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 SMC5Q8IY18 1101 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 NXPE3Q969Y0 559 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 BORCS6Q96GS4 357 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 SHDQ96IW2 340 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 VN1R3Q9BXE9 311 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 MAN1C1Q9NR34 630 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 ZSCAN32Q9NX65 697 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 GMEB2Q9UKD1 530 aa13.58□□□□□ -0.24
CHD2-218ENST00000629346 MTF2Q9Y483 593 aaPredicted RBP13.58□□□□□ -0.24
CHD2-218ENST00000629346 ANKRD11Q6UB99 2663 aaPredicted RBP13.58□□□□□ -0.24
CHD2-218ENST00000629346 EVPLQ92817 2033 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 FAM208BQ5VWN6 2430 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 A0A0U1RQF3 1178 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 ZBTB42B2RXF5 422 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 DDX39AO00148 427 aaKnown RBP13.57□□□□□ -0.24
CHD2-218ENST00000629346 C2CD2LO14523 706 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 RFPL2O75678 378 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 SLC26A2P50443 739 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 STARD6P59095 220 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 GPC5P78333 572 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 PDXDC2PQ6P474 469 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 ZNF598Q86UK7 904 aaKnown RBP13.57□□□□□ -0.24
CHD2-218ENST00000629346 CKAP2LQ8IYA6 745 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 ZBTB44Q8NCP5 570 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 BBXQ8WY36 941 aaPredicted RBP13.57□□□□□ -0.24
CHD2-218ENST00000629346 SMG7Q92540 1137 aaKnown RBP13.57□□□□□ -0.24
CHD2-218ENST00000629346 RRP36Q96EU6 259 aaKnown RBP13.57□□□□□ -0.24
CHD2-218ENST00000629346 LNPKQ9C0E8 428 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 EPC1Q9H2F5 836 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 PSTPIP2Q9H939 334 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 SLC2A4RGQ9NR83 387 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 DNAJB4Q9UDY4 337 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 INPP5FQ9Y2H2 1132 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 NUMBLQ9Y6R0 609 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 LAMA4Q16363 1823 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 COL1A2P08123 1366 aa13.57□□□□□ -0.24
CHD2-218ENST00000629346 COL4A3Q01955 1670 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 SPDYE3A6NKU9 549 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 FAM170BA6NMN3 283 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 SLC30A4O14863 429 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 IFIT3O14879 490 aaKnown RBP13.56□□□□□ -0.24
CHD2-218ENST00000629346 INPPL1O15357 1258 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 ATG7O95352 703 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 C22orf31O95567 290 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 IGHDP01880 384 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 GALTP07902 379 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 LAMP2P13473 410 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 SDSP20132 328 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 CD72P21854 359 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 CLCN3P51790 818 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
CHD2-218ENST00000629346 ITGB3BPQ13352 177 aaPredicted RBP13.56□□□□□ -0.24
CHD2-218ENST00000629346 FAM160B1Q5W0V3 765 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
CHD2-218ENST00000629346 GET4Q7L5D6 327 aaPredicted RBP13.56□□□□□ -0.24
CHD2-218ENST00000629346 CMASQ8NFW8 434 aaPredicted RBP13.56□□□□□ -0.24
CHD2-218ENST00000629346 LPPQ93052 612 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 MXRA8Q9BRK3 442 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 RPP25Q9BUL9 199 aaKnown RBP13.56□□□□□ -0.24
CHD2-218ENST00000629346 PIDD1Q9HB75 910 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 SEC63Q9UGP8 760 aaKnown RBP13.56□□□□□ -0.24
CHD2-218ENST00000629346 ANGPTL2Q9UKU9 493 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 PCDHA6Q9UN73 950 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 AKT3Q9Y243 479 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 PCDHA8Q9Y5H6 950 aa13.56□□□□□ -0.24
CHD2-218ENST00000629346 TBC1D4O60343 1298 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 LILRB5O75023 590 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 CCNE2O96020 404 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 SPATA31D3P0C874 917 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 EIF4BP23588 611 aaKnown RBP13.55□□□□□ -0.24
CHD2-218ENST00000629346 KIF5BP33176 963 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 SLC11A1P49279 550 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 AK2P54819 239 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 TROAPQ12815 778 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 HTR4Q13639 388 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 SWSAP1Q6NVH7 229 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 SPATA31D4Q6ZUB0 917 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 CCDC60Q8IWA6 550 aaPredicted RBP13.55□□□□□ -0.24
CHD2-218ENST00000629346 NETO1Q8TDF5 533 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 ZNF302Q9NR11 478 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 MRPL17Q9NRX2 175 aaKnown RBP13.55□□□□□ -0.24
CHD2-218ENST00000629346 TBC1D13Q9NVG8 400 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 NFASCO94856 1347 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 PKD1L2Q7Z442 2459 aa13.55□□□□□ -0.24
CHD2-218ENST00000629346 FRYQ5TBA9 3013 aa13.54□□□□□ -0.24
CHD2-218ENST00000629346 IGKV6D-21A0A0A0MT36 114 aa13.54□□□□□ -0.24
CHD2-218ENST00000629346 ERICH2A1L162 156 aa13.54□□□□□ -0.24
CHD2-218ENST00000629346 ANHXE9PGG2 379 aa13.54□□□□□ -0.24
CHD2-218ENST00000629346 CSDE1O75534 798 aaKnown RBP13.54□□□□□ -0.24
CHD2-218ENST00000629346 ATP4AP20648 1035 aa13.54□□□□□ -0.24
CHD2-218ENST00000629346 ABHD15Q6UXT9 468 aa13.54□□□□□ -0.24
CHD2-218ENST00000629346 CHD1LQ86WJ1 897 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms