RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 KCNJ14Q9UNX9 436 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 PPME1Q9Y570 386 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 PCDHGC5Q9Y5F6 944 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 CCDC194A0A1B0GVG4 234 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 TBX3O15119 743 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 ATF7P17544 494 aaPredicted RBP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 SFPQP23246 707 aaKnown RBP eCLIP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 KCNC3Q14003 757 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 LETM2Q2VYF4 491 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 CLLU1OSQ5K130 101 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 KCNT2Q6UVM3 1135 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 TMEM184AQ6ZMB5 413 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 ANO5Q75V66 913 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 RBM23Q86U06 439 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 ABI1Q8IZP0 508 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 MICAL1Q8TDZ2 1067 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 ZNF668Q96K58 619 aaPredicted RBP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 ZNF558Q96NG5 402 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 INO80BQ9C086 356 aaPredicted RBP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 NGRNQ9NPE2 291 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 PUF60Q9UHX1 559 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 TPCN1Q9ULQ1 816 aa13.99□□□□□ -0.17
SOX2-OT-247ENST00000628347 A0A087WZ62 844 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 EML1O00423 815 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 P4HBP07237 508 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 FGFR4P22455 802 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 QARSP47897 775 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 CBX2Q14781 532 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 ANKRD1Q15327 319 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 EXOC8Q8IYI6 725 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 VN1R2Q8NFZ6 395 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 FDXACB1Q9BRP7 624 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 MRPL9Q9BYD2 267 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 SUCLA2Q9P2R7 463 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 BARX2Q9UMQ3 279 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-247ENST00000628347 CARNS1A5YM72 827 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 LOC730098B7Z3J9 87 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 PER2O15055 1255 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 CTDNEP1O95476 244 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 NEFLP07196 543 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 SKIP12755 728 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 PHKA2P46019 1235 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 KRT17Q04695 432 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 EPHA7Q15375 998 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 PLPP4Q5VZY2 271 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 RNF135Q8IUD6 432 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 C4orf19Q8IY42 314 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 SLC39A11Q8N1S5 342 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 HELQQ8TDG4 1101 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 OXER1Q8TDS5 423 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 SUSD6Q92537 303 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 WASF1Q92558 559 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 HAS1Q92839 578 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 TCF25Q9BQ70 676 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 SH2D3AQ9BRG2 576 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 DHX33Q9H6R0 707 aaKnown RBP13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 SPG21Q9NZD8 308 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 USP15Q9Y4E8 981 aaPredicted RBP13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 TRIOO75962 3097 aa13.97□□□□□ -0.17
SOX2-OT-247ENST00000628347 CCNT1O60563 726 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 ABCB7O75027 752 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 ZNF623O75123 536 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 CSDE1O75534 798 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 SRGAP2BP0DMP2 458 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 RAB27AP51159 221 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 AK2P54819 239 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 PIK3AP1Q6ZUJ8 805 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 RHPN2Q8IUC4 686 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 RNF169Q8NCN4 708 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 PHF7Q9BWX1 381 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 ENTPD7Q9NQZ7 604 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 MUC6Q6W4X9 2439 aa13.96□□□□□ -0.17
SOX2-OT-247ENST00000628347 GAS2O43903 313 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 FDPSP14324 419 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 PBX3P40426 434 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 RFC5P40937 340 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 NPEPPSP55786 919 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 SPIRE1Q08AE8 756 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 EARS2Q5JPH6 523 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 ERICH6BQ5W0A0 696 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 TWF2Q6IBS0 349 aaKnown RBP13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 CATSPER4Q7RTX7 472 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 SRGAP1Q7Z6B7 1085 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 SLFN12Q8IYM2 578 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 SLC7A3Q8WY07 619 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 TNFRSF25Q93038 417 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 LXNQ9BS40 222 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 S1PR5Q9H228 398 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 KCNH6Q9H252 994 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 GJB4Q9NTQ9 266 aa13.95□□□□□ -0.18
SOX2-OT-247ENST00000628347 FAM105AQ9NUU6 356 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms