RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 KCNMB3Q9NPA1 279 aa8.68□□□□□ -1.02
TCF4-260ENST00000627685 SLC9A2Q9UBY0 812 aa8.68□□□□□ -1.02
TCF4-260ENST00000627685 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
TCF4-260ENST00000627685 VAV3Q9UKW4 847 aa8.68□□□□□ -1.02
TCF4-260ENST00000627685 NAP1L2Q9ULW6 460 aaPredicted RBP8.68□□□□□ -1.02
TCF4-260ENST00000627685 PCDHGA11Q9Y5H2 935 aa8.68□□□□□ -1.02
TCF4-260ENST00000627685 PRUNE2Q8WUY3 3088 aa8.68□□□□□ -1.02
TCF4-260ENST00000627685 LCHNA4D1U4 455 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 EPOPA6NHQ4 379 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 IPO5O00410 1097 aaKnown RBP8.67□□□□□ -1.02
TCF4-260ENST00000627685 CHRNA1P02708 482 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 MYOGP15173 224 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 MARK3P27448 753 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 RABGGTBP53611 331 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 WDR5P61964 334 aaKnown RBP8.67□□□□□ -1.02
TCF4-260ENST00000627685 ADGRE1Q14246 886 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 RAB30Q15771 203 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 PLEKHG4Q58EX7 1191 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 UTP14CQ5TAP6 766 aaKnown RBP8.67□□□□□ -1.02
TCF4-260ENST00000627685 PLA2G4DQ86XP0 818 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 BLIDQ8IZY5 108 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 FAM177A1Q8N128 213 aaPredicted RBP8.67□□□□□ -1.02
TCF4-260ENST00000627685 C7orf31Q8N865 590 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 ZSCAN1Q8NBB4 408 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 GIMAP8Q8ND71 665 aaPredicted RBP8.67□□□□□ -1.02
TCF4-260ENST00000627685 CCDC148Q8NFR7 591 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 TET1Q8NFU7 2136 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 PHOSPHO2Q8TCD6 241 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 TBCKQ8TEA7 893 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 SEPT1Q8WYJ6 367 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 TIFAQ96CG3 184 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 UCN2Q96RP3 112 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 EHMT1Q9H9B1 1298 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 C6orf50Q9HD87 102 aa8.67□□□□□ -1.02
TCF4-260ENST00000627685 WRAP73Q9P2S5 460 aaPredicted RBP8.67□□□□□ -1.02
TCF4-260ENST00000627685 SPTBN5Q9NRC6 3674 aaKnown RBP8.67□□□□□ -1.02
TCF4-260ENST00000627685 NRCAMQ92823 1304 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.66□□□□□ -1.02
TCF4-260ENST00000627685 C17orf102A2RUQ5 167 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 NOP56O00567 594 aaKnown RBP8.66□□□□□ -1.02
TCF4-260ENST00000627685 BAIAP3O94812 1187 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 ACTN1P12814 892 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 INSRRP14616 1297 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 NEK4P51957 841 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 FGD1P98174 961 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 SSRP1Q08945 709 aaKnown RBP8.66□□□□□ -1.02
TCF4-260ENST00000627685 GRIK4Q16099 956 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 DBN1Q16643 649 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 Q4G0T1 1027 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 MOXD1Q6UVY6 613 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 DEFB128Q7Z7B8 93 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 USP38Q8NB14 1042 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 SLC17A8Q8NDX2 589 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 TMEM40Q8WWA1 233 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 HAS1Q92839 578 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 UNC45AQ9H3U1 944 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 AGO3Q9H9G7 860 aaKnown RBP8.66□□□□□ -1.02
TCF4-260ENST00000627685 ERAP1Q9NZ08 941 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 MSRAQ9UJ68 235 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 MAFBQ9Y5Q3 323 aaPredicted RBP8.66□□□□□ -1.02
TCF4-260ENST00000627685 SLC4A7Q9Y6M7 1214 aa8.66□□□□□ -1.02
TCF4-260ENST00000627685 TMEM150BA6NC51 233 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 TMEM229AB2RXF0 380 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 DDX39AO00148 427 aaKnown RBP8.65□□□□□ -1.02
TCF4-260ENST00000627685 EML1O00423 815 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 ATP9BO43861 1147 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 LPXNO60711 386 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 CAND2O75155 1236 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 C22orf31O95567 290 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 CTSHP09668 335 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 GNA11P29992 359 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 USP11P51784 963 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 CHMP4BP1P59074 171 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 SETQ01105 290 aaPredicted RBP8.65□□□□□ -1.02
TCF4-260ENST00000627685 KRT76Q01546 638 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 PPFIA1Q13136 1202 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 LPIN1Q14693 890 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 TARBP2Q15633 366 aaKnown RBP8.65□□□□□ -1.02
TCF4-260ENST00000627685 INF2Q27J81 1249 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 C4orf17Q53FE4 359 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 PRR16Q569H4 304 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 MCTP2Q6DN12 878 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 ZNF746Q6NUN9 644 aaPredicted RBP8.65□□□□□ -1.02
TCF4-260ENST00000627685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
TCF4-260ENST00000627685 PLPPR4Q7Z2D5 763 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 DBF4BQ8NFT6 615 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 CCDC12Q8WUD4 166 aaPredicted RBP8.65□□□□□ -1.02
TCF4-260ENST00000627685 ATP6V0A1Q93050 837 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 CALR3Q96L12 384 aaKnown RBP8.65□□□□□ -1.02
TCF4-260ENST00000627685 FAM161BQ96MY7 647 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 TBC1D32Q96NH3 1257 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 SLC9A7Q96T83 725 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 SLKQ9H2G2 1235 aaPredicted RBP8.65□□□□□ -1.02
TCF4-260ENST00000627685 GPAMQ9HCL2 828 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 ORC3Q9UBD5 711 aaPredicted RBP8.65□□□□□ -1.02
TCF4-260ENST00000627685 STK17AQ9UEE5 414 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms