RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 DLX2Q07687 328 aaPredicted RBP28.71■■■□□ 2.19
TCF4-259ENST00000627568 EPHA7Q15375 998 aa28.71■■■□□ 2.19
TCF4-259ENST00000627568 EARS2Q5JPH6 523 aaKnown RBP28.71■■■□□ 2.19
TCF4-259ENST00000627568 ADGRD2Q7Z7M1 963 aa28.71■■■□□ 2.19
TCF4-259ENST00000627568 CEP170P1Q96L14 293 aa28.71■■■□□ 2.19
TCF4-259ENST00000627568 NLRP4Q96MN2 994 aa28.71■■■□□ 2.19
TCF4-259ENST00000627568 CASD1Q96PB1 797 aa28.71■■■□□ 2.19
TCF4-259ENST00000627568 PRKAG3Q9UGI9 489 aa28.71■■■□□ 2.19
TCF4-259ENST00000627568 FAM205CA6NFA0 338 aa28.7■■■□□ 2.18
TCF4-259ENST00000627568 LINC01565O15544 149 aa28.7■■■□□ 2.18
TCF4-259ENST00000627568 EOMESO95936 686 aa28.7■■■□□ 2.18
TCF4-259ENST00000627568 CENPBP07199 599 aaPredicted RBP28.7■■■□□ 2.18
TCF4-259ENST00000627568 ADAM15Q13444 863 aa28.7■■■□□ 2.18
TCF4-259ENST00000627568 EFHBQ8N7U6 833 aa28.7■■■□□ 2.18
TCF4-259ENST00000627568 RNF19AQ9NV58 838 aa28.7■■■□□ 2.18
TCF4-259ENST00000627568 CD207Q9UJ71 328 aa28.7■■■□□ 2.18
TCF4-259ENST00000627568 PPM1AP35813 382 aa28.69■■■□□ 2.18
TCF4-259ENST00000627568 RFC5P40937 340 aa28.69■■■□□ 2.18
TCF4-259ENST00000627568 NPEPPSP55786 919 aa28.69■■■□□ 2.18
TCF4-259ENST00000627568 SMAD4Q13485 552 aaKnown RBP28.69■■■□□ 2.18
TCF4-259ENST00000627568 PDE12Q6L8Q7 609 aaKnown RBP28.69■■■□□ 2.18
TCF4-259ENST00000627568 OTUD6AQ7L8S5 288 aa28.69■■■□□ 2.18
TCF4-259ENST00000627568 RBM23Q86U06 439 aaKnown RBP28.69■■■□□ 2.18
TCF4-259ENST00000627568 C4orf19Q8IY42 314 aa28.69■■■□□ 2.18
TCF4-259ENST00000627568 TNFRSF25Q93038 417 aa28.69■■■□□ 2.18
TCF4-259ENST00000627568 ZNF558Q96NG5 402 aa28.69■■■□□ 2.18
TCF4-259ENST00000627568 PUF60Q9UHX1 559 aaKnown RBP28.69■■■□□ 2.18
TCF4-259ENST00000627568 PIN4Q9Y237 131 aaKnown RBP28.69■■■□□ 2.18
TCF4-259ENST00000627568 FSD2A1L4K1 749 aa28.68■■■□□ 2.18
TCF4-259ENST00000627568 YWHABP31946 246 aaKnown RBP28.68■■■□□ 2.18
TCF4-259ENST00000627568 FOSBP53539 338 aa28.68■■■□□ 2.18
TCF4-259ENST00000627568 TWF2Q6IBS0 349 aaKnown RBP28.68■■■□□ 2.18
TCF4-259ENST00000627568 CATSPER4Q7RTX7 472 aa28.68■■■□□ 2.18
TCF4-259ENST00000627568 DIS3L2Q8IYB7 885 aaKnown RBP28.68■■■□□ 2.18
TCF4-259ENST00000627568 PSPC1Q8WXF1 523 aaKnown RBP28.68■■■□□ 2.18
TCF4-259ENST00000627568 KHSRPQ92945 711 aaKnown RBP eCLIP28.68■■■□□ 2.182e-6■■■□□ 17.1
TCF4-259ENST00000627568 MRPL9Q9BYD2 267 aaKnown RBP28.68■■■□□ 2.18
TCF4-259ENST00000627568 TLE6Q9H808 572 aa28.68■■■□□ 2.18
TCF4-259ENST00000627568 WRAP73Q9P2S5 460 aaPredicted RBP28.68■■■□□ 2.18
TCF4-259ENST00000627568 LZTS1Q9Y250 596 aa28.68■■■□□ 2.18
TCF4-259ENST00000627568 COL4A3BPQ9Y5P4 624 aa28.68■■■□□ 2.18
TCF4-259ENST00000627568 MBTPS2O43462 519 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 JAK2O60674 1132 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 SKIP12755 728 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 ZP2Q05996 745 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 SMAD2Q15796 467 aaKnown RBP28.67■■■□□ 2.18
TCF4-259ENST00000627568 CALCRLQ16602 461 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 TMEM31Q5JXX7 168 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 CLLU1OSQ5K130 101 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 KCNT2Q6UVM3 1135 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 ZNF598Q86UK7 904 aaKnown RBP28.67■■■□□ 2.18
TCF4-259ENST00000627568 KSR1Q8IVT5 923 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 ADHFE1Q8IWW8 467 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 HELQQ8TDG4 1101 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 ZSWIM4Q9H7M6 989 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 RGL1Q9NZL6 768 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 PCDHGC5Q9Y5F6 944 aa28.67■■■□□ 2.18
TCF4-259ENST00000627568 GAS2O43903 313 aaKnown RBP28.66■■■□□ 2.18
TCF4-259ENST00000627568 PLCB3Q01970 1234 aa28.66■■■□□ 2.18
TCF4-259ENST00000627568 CYP4A11Q02928 519 aa28.66■■■□□ 2.18
TCF4-259ENST00000627568 KRT17Q04695 432 aa28.66■■■□□ 2.18
TCF4-259ENST00000627568 SPIRE1Q08AE8 756 aa28.66■■■□□ 2.18
TCF4-259ENST00000627568 LRRC55Q6ZSA7 311 aa28.66■■■□□ 2.18
TCF4-259ENST00000627568 RSPH1Q8WYR4 309 aa28.66■■■□□ 2.18
TCF4-259ENST00000627568 MRPS27Q92552 414 aaKnown RBP28.66■■■□□ 2.18
TCF4-259ENST00000627568 DYDC2Q96IM9 177 aa28.66■■■□□ 2.18
TCF4-259ENST00000627568 POP1Q99575 1024 aaKnown RBP28.66■■■□□ 2.18
TCF4-259ENST00000627568 DHX33Q9H6R0 707 aaKnown RBP28.66■■■□□ 2.18
TCF4-259ENST00000627568 ARID2Q68CP9 1835 aa28.66■■■□□ 2.18
TCF4-259ENST00000627568 BTBD18B2RXH4 712 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 PI4K2BG5E9Z4 385 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 NEMFO60524 1076 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 ATF7P17544 494 aaPredicted RBP28.65■■■□□ 2.18
TCF4-259ENST00000627568 PHKA2P46019 1235 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 RAB27AP51159 221 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 CTTNQ14247 550 aaKnown RBP28.65■■■□□ 2.18
TCF4-259ENST00000627568 TCP11Q8WWU5 503 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 CDCA3Q99618 268 aaPredicted RBP28.65■■■□□ 2.18
TCF4-259ENST00000627568 TRAIPQ9BWF2 469 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 ENTPD7Q9NQZ7 604 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 BMP2KQ9NSY1 1161 aaPredicted RBP28.65■■■□□ 2.18
TCF4-259ENST00000627568 PCDHA12Q9UN75 941 aa28.65■■■□□ 2.18
TCF4-259ENST00000627568 SEC24BO95487 1268 aa28.64■■■□□ 2.18
TCF4-259ENST00000627568 ERVFC1P60507 584 aa28.64■■■□□ 2.18
TCF4-259ENST00000627568 EMC2Q15006 297 aa28.64■■■□□ 2.18
TCF4-259ENST00000627568 XKR9Q5GH70 373 aa28.64■■■□□ 2.18
TCF4-259ENST00000627568 TPH2Q8IWU9 490 aa28.64■■■□□ 2.18
TCF4-259ENST00000627568 ZNF579Q8NAF0 562 aaKnown RBP28.64■■■□□ 2.18
TCF4-259ENST00000627568 TMEM143Q96AN5 459 aa28.64■■■□□ 2.18
TCF4-259ENST00000627568 MSLNLQ96KJ4 702 aa28.64■■■□□ 2.18
TCF4-259ENST00000627568 SPG21Q9NZD8 308 aa28.64■■■□□ 2.18
TCF4-259ENST00000627568 ALADP13716 330 aa28.63■■■□□ 2.17
TCF4-259ENST00000627568 PBX3P40426 434 aa28.63■■■□□ 2.17
TCF4-259ENST00000627568 SAFBQ15424 915 aaKnown RBP eCLIP28.63■■■□□ 2.17
TCF4-259ENST00000627568 PLPP4Q5VZY2 271 aa28.63■■■□□ 2.17
TCF4-259ENST00000627568 PRPF31Q8WWY3 499 aaKnown RBP28.63■■■□□ 2.17
TCF4-259ENST00000627568 TCF25Q9BQ70 676 aa28.63■■■□□ 2.17
TCF4-259ENST00000627568 IFT122Q9HBG6 1241 aa28.63■■■□□ 2.17
TCF4-259ENST00000627568 LIMCH1Q9UPQ0 1083 aa28.63■■■□□ 2.17
TCF4-259ENST00000627568 FSCN2O14926 492 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms