RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 JAM2P57087 298 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 PRKCEQ02156 737 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 XKR3Q5GH77 459 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 PAPD7Q5XG87 772 aaKnown RBP24.09■■□□□ 1.45
PNKP-220ENST00000627232 FASTKD5Q7L8L6 764 aaKnown RBP24.09■■□□□ 1.45
PNKP-220ENST00000627232 ARMC9Q7Z3E5 817 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 NCAPG2Q86XI2 1143 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 CCDC60Q8IWA6 550 aaPredicted RBP24.09■■□□□ 1.45
PNKP-220ENST00000627232 FAM133AQ8N9E0 248 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 TRIM58Q8NG06 486 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 GOLGA1Q92805 767 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 N4BP1O75113 896 aaKnown RBP24.08■■□□□ 1.45
PNKP-220ENST00000627232 TACC1O75410 805 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 ABCD1P33897 745 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 SLC18A3Q16572 532 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 TRAPPC11Q7Z392 1133 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 IRF2BP2Q7Z5L9 587 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 XXYLT1Q8NBI6 393 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 TMEM161BQ8NDZ6 487 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 RABGGTAQ92696 567 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 KCNG1Q9UIX4 513 aa24.08■■□□□ 1.45
PNKP-220ENST00000627232 SOWAHBA6NEL2 793 aa24.07■■□□□ 1.44
PNKP-220ENST00000627232 OSBPP22059 807 aa24.07■■□□□ 1.44
PNKP-220ENST00000627232 NPTX2P47972 431 aa24.07■■□□□ 1.44
PNKP-220ENST00000627232 SP2Q02086 613 aa24.07■■□□□ 1.44
PNKP-220ENST00000627232 GFPT1Q06210 699 aaPredicted RBP24.07■■□□□ 1.44
PNKP-220ENST00000627232 MAP4K3Q8IVH8 894 aa24.07■■□□□ 1.44
PNKP-220ENST00000627232 GPR161Q8N6U8 529 aaKnown RBP24.07■■□□□ 1.44
PNKP-220ENST00000627232 CYP26B1Q9NR63 512 aa24.07■■□□□ 1.44
PNKP-220ENST00000627232 SEPT9Q9UHD8 586 aaPredicted RBP24.07■■□□□ 1.44
PNKP-220ENST00000627232 TBX20Q9UMR3 447 aa24.07■■□□□ 1.44
PNKP-220ENST00000627232 MAFBQ9Y5Q3 323 aaPredicted RBP24.07■■□□□ 1.44
PNKP-220ENST00000627232 SYNGAP1Q96PV0 1343 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 P4HA2O15460 535 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 H2AFXP16104 143 aaPredicted RBP24.06■■□□□ 1.44
PNKP-220ENST00000627232 CHMP4BP1P59074 171 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 MOGSQ13724 837 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 C10orf76Q5T2E6 689 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 MOB2Q70IA6 237 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 FMNL3Q8IVF7 1028 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 RNF10Q8N5U6 811 aaKnown RBP24.06■■□□□ 1.44
PNKP-220ENST00000627232 MPHOSPH6Q99547 160 aaKnown RBP24.06■■□□□ 1.44
PNKP-220ENST00000627232 PAGR1Q9BTK6 254 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 ATP6V0A4Q9HBG4 840 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 KMT5AQ9NQR1 393 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 HSPBP1Q9NZL4 362 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 ATP8B3O60423 1300 aa24.06■■□□□ 1.44
PNKP-220ENST00000627232 MACROD2A1Z1Q3 448 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 GLTPD2A6NH11 291 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 CCDC169A6NNP5 214 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 H0YCG3 227 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 TGFB3P10600 412 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 FERP16591 822 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 RFX1P22670 979 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 MYL7Q01449 175 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 IQCEQ6IPM2 695 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 SEPT14Q6ZU15 432 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 CYFIP1Q7L576 1253 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 OPTNQ96CV9 577 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 ZNF302Q9NR11 478 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 DUSP10Q9Y6W6 482 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 IGKV6D-21A0A0A0MT36 114 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 PEX10O60683 326 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 SCP2P22307 547 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 VAMP7P51809 220 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 FSTL1Q12841 308 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 FBXO38Q6PIJ6 1188 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 TRMT1LQ7Z2T5 733 aaKnown RBP24.05■■□□□ 1.44
PNKP-220ENST00000627232 KCNN1Q92952 543 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 CBWD1Q9BRT8 395 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 XPNPEP1Q9NQW7 623 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 TELO2Q9Y4R8 837 aa24.05■■□□□ 1.44
PNKP-220ENST00000627232 IQCA1LA6NCM1 817 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 PMM2O15305 246 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 ATP1A1P05023 1023 aaKnown RBP24.04■■□□□ 1.44
PNKP-220ENST00000627232 TRIM49P0CI25 452 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 TRIM49CP0CI26 452 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 STAT1P42224 750 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 SP4Q02446 784 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 NEDD9Q14511 834 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 CBWD6Q4V339 395 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 CBWD3Q5JTY5 395 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 CBWD5Q5RIA9 395 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 TEX35Q5T0J7 233 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 LDLRAD1Q5T700 205 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 BSNDQ8WZ55 320 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 VTI1AQ96AJ9 217 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 IFT74Q96LB3 600 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 ALS2CR12Q96Q35 445 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 STK33Q9BYT3 514 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 INTS2Q9H0H0 1204 aaKnown RBP24.04■■□□□ 1.44
PNKP-220ENST00000627232 PCIF1Q9H4Z3 704 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 TAF1DQ9H5J8 278 aaPredicted RBP24.04■■□□□ 1.44
PNKP-220ENST00000627232 JRKLQ9Y4A0 524 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 SAR1BQ9Y6B6 198 aa24.04■■□□□ 1.44
PNKP-220ENST00000627232 DENND3A2RUS2 1198 aa24.03■■□□□ 1.44
PNKP-220ENST00000627232 UNCXA6NJT0 531 aa24.03■■□□□ 1.44
PNKP-220ENST00000627232 TISP43B9A030 160 aa24.03■■□□□ 1.44
PNKP-220ENST00000627232 UBA1P22314 1058 aaKnown RBP24.03■■□□□ 1.44
PNKP-220ENST00000627232 ARID5AQ03989 594 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms